Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_12015
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Entry
IPM89_12015 CDS
T10208
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbly03016
]
IPM89_12015 (miaB)
Enzymes [BR:
cbly01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
IPM89_12015 (miaB)
Transfer RNA biogenesis [BR:
cbly03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
IPM89_12015 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
QQS53591
LinkDB
All DBs
Position
complement(2675385..2676749)
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AA seq
454 aa
AA seq
DB search
MTRKLYIKTHGCQMNEYDSAKMADVLRVAHGLERTDDPDQADVLLLNTCSIREKAQEKVF
SQLGQWKAHKSRRPGAVIGVGGCVASQEGEALRERAPQVDLVFGPQTLHRLPDMLSAVWA
DRHPVVDVSFPEIEKFDRLPEPRAEGPTAFVSIMEGCSKYCTFCVVPYTRGEEVSRPFAA
VLAEVAALAAQGVREITLLGQNVNAYAGPTDDGESADLALLIEYVAAIDGIDRVRYTTSH
PVEFSDRLIEAYARVPQLVSHLHLPVQSGSDRILALMKRGHTALEYKAKIRKLRATRPDI
SLSSDFIVGFPGETERDFEATMALIDEIGFDHSFSFIYSPRPGTPAASLADPTPLTVKKE
RLAHLQARIEDGARAMSQRMVGTVQRVLVDRLSRKDDRQLSGRTENNRVVNFDGPPGLIG
RFADLAITEALPNSLRGRLLACPELPVAALKPAS
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcaaactttacatcaagacccacggctgccagatgaacgaatacgactccgcc
aaaatggcggatgtcctgcgcgtggcccacggtctggagcgtaccgacgaccccgaccag
gcggacgtcctgctgctcaatacctgctccatccgcgaaaaggcccaggaaaaggtgttt
tcgcaactgggccagtggaaagcccataaatcccgccgccccggcgcggtgatcggcgtc
ggcggctgcgtcgccagccaagagggcgaggcgctgcgcgagcgggcgccgcaggtcgat
ctggtgttcggcccgcaaaccctgcaccggttgccggacatgctctcggccgtgtgggcc
gaccgccatcccgtcgtcgatgtttccttcccggagatcgaaaaattcgaccggctgccg
gaaccgcgcgccgaagggccgaccgcctttgtctcaatcatggaaggatgcagcaaatac
tgcaccttctgcgtggtgccctacacccgcggcgaggaagtcagccggccgttcgccgcc
gttttggccgaagtggcggcgctggccgcgcagggtgtgcgcgaaatcaccctgctcggc
caaaatgtcaacgcctacgccgggccgaccgacgacggcgagagcgccgatctagccctg
ctgatcgaatatgtcgccgccattgacggcatcgaccgcgtccgctacaccacctcccac
ccggtggaattttccgaccggctgatcgaggcttacgcccgcgtcccgcaactggtcagc
cacctgcacctgccggtgcaaagcggttccgaccgcatcctggcgttgatgaaacgcggc
cacaccgcgctggaatacaaggccaaaattcgcaagctgcgcgccacgcgcccggacatc
agcctgtcctcggatttcatcgtcggcttccccggcgaaaccgagcgggatttcgaggca
accatggcgttgatcgacgagatcggcttcgatcacagcttcagcttcatctacagcccc
cggcccggtacccccgccgccagcctggccgaccccacgccgctgaccgtcaagaaagaa
cgactcgcgcatctgcaagcacggatcgaggacggcgcgcgcgccatgagccaaaggatg
gtcggcaccgtccagcgggtgctggtggaccggctctcgcgcaaggacgaccggcaactg
tcggggcgcaccgagaacaatcgcgtggtcaacttcgacggcccacccggactgatcggc
cgcttcgccgatctcgccatcaccgaggcgctgcccaattccctgcgcggtcgcctgctg
gcctgtccggagttgccggtggccgcgctcaagccagccagctag
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