Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_12425
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Entry
IPM89_12425 CDS
T10208
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00541
Biosynthesis of various nucleotide sugars
cbly01100
Metabolic pathways
cbly01250
Biosynthesis of nucleotide sugars
Module
cbly_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IPM89_12425 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
cbly01005
]
IPM89_12425 (kdsA)
Enzymes [BR:
cbly01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
IPM89_12425 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
cbly01005
]
Lipid A
IPM89_12425 (kdsA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QQS55909
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Position
complement(2764214..2765053)
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AA seq
279 aa
AA seq
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MKLCGFEVGLDRPLFLIAGPCVIESEQLALDTAGRLKEIADRLGIPFIYKSSFDKANRSS
HQSHRGPGLAEGLKILDTVKRQIGVPVLTDVHEYTPLAEVAAVVDVLQTPAFLCRQTDFI
QNVARQGKPVNIKKGQFLAPWDMRNVVAKARIAGNDHIMVCERGASFGYNNLVSDMRALT
VMRATGCPVVFDATHSVQLPGGQGTVSGGQREFVPVLARAAVAVGIAGLFMETHPDPDRA
LSDGPNAWPLDRMEPLLIALQALDALVKRQGFLETELSF
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaactctgcggtttcgaggtcggcctggatcgaccgctgttcctgatcgccggcccc
tgcgtgatcgaatccgagcaactggccctggataccgccggccggctgaaggagatcgcc
gatcgactgggcattccattcatctataaatcttcgttcgacaaagccaaccgctcctcg
caccagagccatcgcggccccggtctggcggagggactgaagatcctggatacggtcaag
cgtcaaatcggcgtgccggtgctgaccgatgtgcacgaatacaccccgctggcggaagtc
gcggccgtggtggacgtgttgcaaacgccggctttcttgtgccggcagaccgatttcatc
cagaacgtcgcccgccagggcaagccggtcaacatcaaaaagggccagtttctcgccccc
tgggacatgcgcaacgtggtcgccaaggcacgcatcgccggcaacgaccacatcatggtc
tgcgaacgtggcgcttcctttggctacaataacctggtgtccgacatgcgcgccctgacg
gtgatgcgcgccaccggctgcccggtggtgttcgatgccacccattcggtgcaattgccg
ggcggtcagggcaccgtttccggcggccagcgcgaattcgtgccggtgctggcgcgggcg
gcggtggcggtcggcatcgctggattattcatggaaacccatcccgacccggatcgggcg
ctgagcgacggtcccaacgcctggccgctggaccggatggaacctttactgatcgcgctg
caagccctggatgcgttggtcaagcggcagggtttcctggaaaccgagctgagcttttaa
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