Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_12885
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Entry
IPM89_12885 CDS
T10208
Symbol
icd
Name
(GenBank) isocitrate dehydrogenase (NADP(+))
KO
K00031
isocitrate dehydrogenase [EC:
1.1.1.42
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00020
Citrate cycle (TCA cycle)
cbly00480
Glutathione metabolism
cbly00720
Other carbon fixation pathways
cbly01100
Metabolic pathways
cbly01110
Biosynthesis of secondary metabolites
cbly01120
Microbial metabolism in diverse environments
cbly01200
Carbon metabolism
cbly01210
2-Oxocarboxylic acid metabolism
cbly01230
Biosynthesis of amino acids
cbly04146
Peroxisome
Module
cbly_M00009
Citrate cycle (TCA cycle, Krebs cycle)
cbly_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
IPM89_12885 (icd)
09102 Energy metabolism
00720 Other carbon fixation pathways
IPM89_12885 (icd)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
IPM89_12885 (icd)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
IPM89_12885 (icd)
Enzymes [BR:
cbly01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.42 isocitrate dehydrogenase (NADP+)
IPM89_12885 (icd)
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GFIT
Motif
Pfam:
Iso_dh
CBS
Bac_A_amyl_C
Flot
Motif
Other DBs
NCBI-ProteinID:
QQS53738
LinkDB
All DBs
Position
2853050..2854813
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AA seq
587 aa
AA seq
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MAYQHIRIPTSGEKITVKDGKLHVPDQPIVGYVEGDGIGPDITKASLRVWDAAVEEAYSG
QRKINWCEIFLGEKAAEIYDGNYFPDETLEAIKELVVAIKGPLTTPVGGGFRSLNVALRQ
DLDLYACVRPVRYYPGVPSPVRFPEKVDVIIFRENTEDVYAGIEYQSGSPENVKLAKFLR
EEMGANFFDAAGLGIKPISPFASKRLVRKAIQYAIDHGRDSVTLVHKGNIMKFTEGAFRN
WGYELARDEFPDQTITENDLYSVYGGKQPPGKVVIKDRIADIIFQLLQLRPEEFSVLATM
NLNGDYLSDAVAAEVGGIGIAPGANMADHIAVFEATHGTAPKYANLDKVNPGSLMLSGVM
MLQYMGWKEAADLIEIALTQVIADKTVTYDFARQMEGATEVPTSQFGDLIIAKIKAHGAT
LRAEAEQRRRELEAERRVLEAQRVADPLQAMLASGRMPTTVGGIMSPVIKVRNDELVNVA
MHQMIEKGVNAVMIEPDASGQWGIMTDRDVLKKVISANRSPARTQVGEIATRPLVTVKRE
MSLSDASQRMAEANVRRVVVEMDGKPVGMVTDSDLFRTVEVFGWGEV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcctaccagcatatccgcattcccacgagcggtgaaaagattaccgtcaaggatggc
aagctacacgtacccgatcagccgatcgtcggctatgtggaaggcgacggcatcggtccg
gatatcaccaaggcctccctgcgagtctgggacgcggcggtcgaggaagcctacagtggc
cagcgcaagattaactggtgcgaaatcttcctgggcgagaaagccgccgagatttacgac
ggcaattacttccccgatgaaaccctggaagcgatcaaagagctggtcgtggccatcaag
ggtcccctgaccacgccggtcggtggtggcttccgctcgctgaacgtggccttgcgccag
gatctggacctgtacgcctgcgtccgaccggtgcgttactaccccggcgtaccctcgccg
gtgcgctttcccgagaaagtggacgtcatcatcttccgcgagaacaccgaggacgtctac
gccggcatcgagtaccagtccggttcccccgagaacgtcaaactggccaagttcctgcgc
gaggagatgggcgccaacttcttcgatgccgccgggctgggcatcaagccgatttcgcca
ttcgcctccaagcggctggtgcgcaaggccatccagtacgcgatcgaccatggccgcgac
agcgtgaccctggtccacaagggcaacatcatgaagttcacggaaggcgccttccggaac
tggggctacgaactggcgcgcgacgagttcccggatcaaaccatcaccgagaacgacctg
tacagcgtctacggcggcaagcaaccccccggcaaggtggtgatcaaggaccgtatcgcc
gacatcatcttccagttgctgcaattgcggccggaagaattctcggtgctggccaccatg
aacctgaacggtgactacctctccgacgcggtggcggcggaagtgggcggcatcggcatc
gcgccgggcgccaacatggccgaccatatcgccgtgttcgaggccacccacggcaccgcg
cccaagtacgccaatctggacaaggtcaatcccggctccctgatgctgtccggcgtgatg
atgttgcagtacatgggttggaaggaagccgccgacctgatcgaaatcgcgctgacccag
gtgatcgccgacaagaccgttacttacgattttgcccggcagatggagggcgccaccgag
gtaccgaccagccagttcggtgacctgatcatcgccaagatcaaggcgcacggcgccacc
ctgcgcgccgaggccgaacagcgccgtcgggaactcgaagccgagcgccgcgttctggaa
gcacaacgcgtggccgatcccttgcaggcgatgctggcttccggccgcatgccgaccacg
gtgggcggcatcatgtcgccagtgatcaaagtcaggaacgacgaactggtcaacgtcgcc
atgcaccagatgatcgaaaagggtgtgaacgcggtcatgatcgagcccgacgccagcggc
caatggggcatcatgaccgaccgcgacgtgctcaagaaggtcatcagcgccaatcgctcg
ccggcgcgtacccaggtcggcgaaatcgccacccggccgctggtgacggtcaagcgcgaa
atgtcgctgtccgatgcctcgcagcgcatggccgaggccaacgtgcgccgcgtcgtggtc
gagatggacggcaagccggtcggcatggtgaccgacagcgatctgttccgcaccgtggaa
gtgttcggctggggcgaagtctga
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