Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_12995
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Entry
IPM89_12995 CDS
T10208
Name
(GenBank) peptidase domain-containing ABC transporter
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly02010
ABC transporters
cbly03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IPM89_12995
03070 Bacterial secretion system
IPM89_12995
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbly02000
]
IPM89_12995
02044 Secretion system [BR:
cbly02044
]
IPM89_12995
Transporters [BR:
cbly02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IPM89_12995
Secretion system [BR:
cbly02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
IPM89_12995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
Peptidase_C39
ABC_tran
cNMP_binding
SMC_N
AAA_22
RsgA_GTPase
AAA_33
AAA_25
Guanylate_cyc_2
nSTAND3
TsaE
AAA_29
NACHT
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QQS53758
LinkDB
All DBs
Position
complement(2884562..2887612)
Genome browser
AA seq
1016 aa
AA seq
DB search
MSSEILLETLAGIELLAPIGRGDLEHLAARAEIQTYDLGDTMFTAGEPGLGLYLVKSGTV
RLLTTEGGKDVSIGIRRAGELLAETAALRDYRFEFTARASGKTELVFVPRDAMASMLARY
PVVGGLLARQASINAAGGFISQLFQLRGKVDKDELVQLVDSIGIKKVAAGDVILEQDSLE
DRRLYVVRRGTVRGIRMEGGVELPMAILGHGEMFGENTCLLDVAQPVTMQAASDAVLLVI
PQQTVRTILERNPQLKETLRTRIQFAEHELERQKQLLERRNRPLSLDLRSKPGIGERVLK
RFPLVEQAEEMDCGAACLAMICKHYRIGATLGKLREMANVTTEGATLDSLAQVGESLGFT
THGVQCTYQTVLGFELPFIAHWEGYHYIVVYGVSKNQVWVADPGLGFRKLSIAEFEKGWT
GTCLLFTPRADLAQIEATRSPWMRFVRLLRPHKPVLGYLILATLVIQVLGIVPPIILQNI
LDRVVVHQSHELLNLLIVGFILVQVFMQLTALMRTYLTNFMVRNLDFSMMSQFFQHTLSL
PIAFFAKRRTGDIFARFQENQTIRQFLTQSTISTLLNLLMVFFYFLVLFMYSVQMTLVLL
ALIVPMVVLTVAITPRIKQYARRDFEASTDAEAVLMETLNGAETIKAMGIERAIRLKWEQ
KYAKALNVQYKAQGFEALVGLASQLLHAVTVTSVLWIGANLVLGQQLTIGQLIAFNMLMG
SVMAPLMGLIGMWDELHEAGVAMERLGDVLDMEPEQKPEDQSSRILLPSLRGDIRLEDVY
FRYGGKETPYVLENISFELKAGETVALVGHSGSGKTTLAKLLVGFHPPSEGKISIDGYNL
NLIDKDYYRAQIGYVMQSNLLFSGTVAENIALGEVNPDRRRIVEVARLADAHGFISKLPQ
GYEQTVGERGVGLSGGQIQRLCIARSLYRDPRLLIFDEATSALDTQSETNILRNLSGVLE
GRTALVIAHRLSTIMNADKILVLYQGRIVEEGTHQTLFDRQGMYYQLIHKQIAAAA
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
gtgagttccgaaattctgctcgaaaccctggctggcatcgaattgctggctcccatcggc
cgcggcgacctggaacatctggccgcgcgcgctgaaatccagacctacgaccttggcgat
acgatgttcacggccggggaaccgggattgggtctgtatctcgtcaaatccggcacggtt
cgcctgctgaccacggaaggcggcaaggatgtcagcatcgggatccgtcgtgccggcgaa
ttgttggccgaaaccgccgcgctgcgcgactaccgcttcgaattcaccgcgcgcgcttcc
ggcaagaccgaattggtgttcgtcccccgcgatgccatggcctcgatgctggcccgttat
ccggtggtcggcggtctgttggcccgtcaggccagcatcaatgccgccggcggtttcatc
agccagttgttccagttgcgcggcaaggttgataaggacgagctcgtccaactggtcgat
agcatcggcattaagaaggtggcggccggggatgtcatcctggagcaggatagccttgag
gaccgccggctctacgtggtgcgccgaggcacggtgcgcggcattcggatggagggcggc
gtcgaactgcccatggccattctgggccatggggagatgttcggcgaaaacacctgcctg
ctggacgtggcgcaacccgtgaccatgcaggccgccagcgacgcggtgctgctggtgatc
ccgcaacaaaccgtgcgcaccatcctggaacgcaatccccaactgaaggaaacgctgcgg
acccgcatccagttcgccgaacacgaactggaacgccaaaagcaactgctcgaacggcgc
aaccgaccgctgagcctggatctgcgctccaaacccggcatcggcgagcgggtgctcaaa
cggttcccactggtcgagcaagccgaggagatggactgcggcgcggcttgcctggccatg
atctgcaagcactaccggatcggcgcgaccctgggcaagctgcgggagatggccaacgtc
accactgaaggcgccactctggacagcttggcgcaggtaggcgagtcgctggggttcacc
acccatggcgtgcagtgtacctaccagaccgtgctgggcttcgagctgccgtttatcgcc
cactgggaagggtatcactacatcgtggtctacggcgtttccaagaaccaggtctgggtg
gcggacccaggactcggttttcgcaagctgagcatcgccgaattcgagaagggctggacc
ggcacctgtttgttgttcaccccccgcgccgatctggcgcaaatcgaggccacccgttcc
ccctggatgcggttcgtgcgcctgttgcgcccccacaagccggtgctcggctatttgatc
ctggcgacgctggtgatccaggtgctcggtatcgttcccccgatcattctccaaaacatc
ctggatcgcgtcgtcgttcaccaaagccacgaactgctgaatctactgatcgtcggtttt
atcctggtgcaggtcttcatgcagttgaccgcgttgatgcgcacctatctgaccaacttc
atggtgcgcaacctcgatttctcgatgatgtcgcagttctttcagcacacgctgtccctg
ccgatcgcctttttcgccaagcgccgcaccggcgacatcttcgcgcggtttcaggaaaat
cagaccattcgccagttcctgacccaatccacgatcagcacgctgctgaacctgttgatg
gtgtttttctactttctggtgctgttcatgtacagcgttcagatgaccctggtcctgctg
gccctgatcgtgccgatggtggtgttgaccgtggccatcaccccgcgcatcaagcaatac
gcgcggcgcgacttcgaggcctcgaccgacgccgaagccgtgttgatggaaaccctgaac
ggcgccgagaccatcaaggccatgggtatcgagcgcgccatccggctgaaatgggaacaa
aaatatgccaaggcattgaatgttcaatataaggcccagggtttcgaagcgctggtcggt
cttgccagtcagttgttgcacgccgtgaccgtgacctcggtactgtggatcggcgccaat
ctggtgctcggccagcagctcaccatcggtcagttgattgccttcaacatgttgatgggc
agcgtgatggcgccgctcatgggcttgatcggcatgtgggacgagttgcacgaagccggg
gtggcgatggagcggctcggcgatgtgctggacatggagccggaacagaaacccgaggat
cagtcctcgcgcatcctgctgcccagcctgcgcggcgatatccgcctggaagacgtgtac
tttcgctacggtggcaaagagaccccctatgttctggaaaacatcagtttcgaactgaaa
gccggggaaaccgtcgccctcgttggccatagcggctccggcaagaccacgctggccaag
ctgctggtcggtttccatccgcccagcgaaggcaagatctccatcgatggctacaacctg
aacctgatcgacaaagactactatcgcgcgcagatcggctatgtgatgcaaagcaatctg
ctgttttccggcaccgtcgccgagaacatcgccctgggcgaggtcaatcccgaccggcgc
cgcatcgtcgaggtggcccgcttggccgacgcccacggtttcatcagcaagctgccgcaa
ggttacgaacagaccgtgggcgagcggggcgtcggcctgtcgggcggccaaatccagcgg
ctctgcatcgcccgttccttgtatcgggacccccggttgttgatcttcgacgaggccacc
tcggccctcgatacacaatccgagaccaacattctccgtaatctgtcgggtgtcctggaa
ggtcgcaccgccctggtcatcgcccaccgactcagcaccatcatgaacgccgacaagatc
ctggtcctgtatcagggtcgcatcgtcgaggaagggactcaccaaacgctgttcgaccgt
cagggcatgtactatcaattgatacacaagcagatcgcggcggcggcatga
DBGET
integrated database retrieval system
