Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_13715
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Entry
IPM89_13715 CDS
T10208
Symbol
lptD
Name
(GenBank) LPS assembly protein LptD
KO
K04744
LPS-assembly protein
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cbly02000
]
IPM89_13715 (lptD)
Transporters [BR:
cbly02000
]
Other transporters
Pores ion channels [TC:
1
]
IPM89_13715 (lptD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptD
LptD_N
Moricin
Motif
Other DBs
NCBI-ProteinID:
QQS53881
LinkDB
All DBs
Position
complement(3042762..3045035)
Genome browser
AA seq
757 aa
AA seq
DB search
MTPYFRVLATGAVLAVLPLVGVQAQSTFNPWLQCEADELAQEIVPVTPNAPLPDDLPVRA
EAGRIESSATLSVLEGGVNLSRGDQRLRAERMTLERPANRVRVEGGFTYGDPNQALRGTQ
AEVDLNAETGWFKDADYYLPGRNAQGYAEAVNVDRAQQSSQLEDATYSTCPRGREAWELR
ARRLNLNAASGRGTAHDIVLAFKDTPVFYFPYLSFPITEERQSGFLFPLQGYDSETGLDL
SVPYYWNIAPDRDMTFTPRLMSARGLLLGAEYRYLYPDRRGEIDAEYIPYDRRFGGDRGS
FNIVDRATPLPNLYTNLRFEYVSDDSYIRDLSNNLDFLTVNYLERYLDVRYQGDWWRALA
RVQGYQILNPALFALTGDPYERLPQLVFDGAWPTGVGGFNYRLHGEVVRFQQSDSEVVTG
ARLDLWPTVGWALEKPWGYLKPQAGFRYTGYQLDNTASGANDAPSRAAPLLGLDSGLIFE
RPLQADWLGVTAGTQTLEPRLFYLYVPYRDQNDIPLFDSNFMDRDFDWLFRWNRFVGADR
LGDANQLTAALTTRLIDGPSGRERLRASIGQIQYFEDRRVTLYPELPPDTEANSGVIAQG
ALNLSGRWSVQGGVQLEPDNSDLLRTALDLRYYANPRQFVNLSYLRDRNPVNLGLSDQIH
SVDASLIWPLSSRFRVLARWNQALNIDRNLETLAGLEYEDCCWALRAVARQYRDSPLEVD
AQTGFYLELELKGLSRLGGGLETVLQSSIFGYQPIRY
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
gtgacgccgtatttccgagtgctggcgaccggcgccgtgctggcggtactgccgctggtc
ggcgtccaggcgcaatccaccttcaatccatggctccagtgcgaagccgacgaactggct
caagagatcgtgccggtcactccgaacgcaccgttgccggacgatctgccggtgcgggcc
gaagccggccggatcgaatcctcagccaccttgtccgtgctggaaggcggcgtcaacctg
tctcgcggcgaccagcgtttgcgcgccgagcggatgaccttggagcgcccggccaaccga
gttcgagtcgagggaggattcacctacggcgatcccaaccaggccttgcgtggcacccag
gcggaggtggatctgaacgccgagaccggctggttcaaggatgcggattactatttgccg
ggacgcaatgcccagggttacgccgaggcagtgaacgtggaccgtgcccaacagagcagt
caactggaagacgccacctattcaacctgcccgcgcggtcgggaagcgtgggaattgcgg
gcacgccgactcaacctgaacgcggcgagcggccgcggcacggcccatgatatcgtgctg
gcgttcaaggatacgccggtgttctattttccgtatctgtcgtttcccatcaccgaggag
cggcagtccggattcctgtttccacttcagggctacgatagcgagaccggcctggatctc
tcggttccttattattggaacatcgcgccggatcgcgacatgaccttcaccccccggctg
atgtccgcgcgtgggttgctgttgggcgcggagtaccgctatctataccccgatcggcgg
ggggaaatcgacgctgagtacatcccttatgatcgtcgtttcggcggcgaccgtggttcc
ttcaatatcgtcgaccgcgccacgccgctacccaacctctacaccaatctgcggttcgaa
tacgtctccgacgatagctacatccgggacttaagcaacaatctggatttcctgacggtc
aactacctggaacggtatctggatgtgcgctaccagggagactggtggcgggcgctggcg
cgggtgcagggttatcagattctgaatccggcgctgtttgccctgaccggggacccctac
gagcgcctgccacaattggtgttcgacggtgcctggccaaccggagtcggcggcttcaac
taccgtttgcacggcgaagtggtgcgcttccagcaatccgactccgaagtagtgaccggc
gcccgcctggatctgtggccgaccgtgggttgggcgttggaaaaaccctggggatacctg
aaaccccaggctggatttcgctacaccggctatcagcttgacaacaccgcatcgggcgcc
aacgatgcgccctcgcgcgccgcgccgctgctcggtctggacagcggcttgatcttcgag
cggcccttgcaggccgactggctgggcgtaacggccgggacgcagacgctggagccgcgg
ctgttctatctctatgtgccttatcgcgaccagaacgacattcctctcttcgacagcaac
ttcatggatcgggatttcgactggctgtttcgctggaaccggttcgtcggcgccgaccga
ttgggcgacgccaaccaattgaccgccgcgttgactacccggttgatcgatggtccaagt
ggtcgcgaacggttgcgtgccagcatcggccagatccaatatttcgaggatcgtcgggta
actttgtaccccgagctaccgccggataccgaggcgaattcgggagtgatcgctcagggg
gcgttaaatctgtcaggccgctggtcggttcaaggcggtgtgcaactggagccggacaac
agcgatttactacgtaccgcgctcgacctgcgttactacgccaatccacgccagttcgtc
aatttgtcctacctgcgggaccgcaatccggtcaacctgggattgagcgatcaaatccac
tccgtggatgcatcactgatatggccgttgagctcgcgatttcgggtgttggcgcgctgg
aaccaggctctgaacatcgaccgcaatctggaaaccctggctgggctggaatatgaggat
tgttgttgggcgctgcgggcggtcgcgcgccagtaccgagacagcccgctggaagtcgat
gcgcaaaccggtttttacctggaactggagttgaagggactgtctcgattgggcggtggt
ctggagaccgtgctgcaaagttccatcttcggctatcagccgatccgttactag
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