Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_13965
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Entry
IPM89_13965 CDS
T10208
Symbol
cobD
Name
(GenBank) cobalamin biosynthesis protein CobD
KO
K02227
adenosylcobinamide-phosphate synthase [EC:
6.3.1.10
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly00860
Porphyrin metabolism
cbly01100
Metabolic pathways
cbly01240
Biosynthesis of cofactors
Module
cbly_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
IPM89_13965 (cobD)
Enzymes [BR:
cbly01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.10 adenosylcobinamide-phosphate synthase
IPM89_13965 (cobD)
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GFIT
Motif
Pfam:
CobD_Cbib
Motif
Other DBs
NCBI-ProteinID:
QQS53925
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All DBs
Position
3095463..3096431
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AA seq
322 aa
AA seq
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MDLVGAHFALVLIACLLDAGFGDPVYPLHPIRLLGVWSLAWERRLFAAGLNGYLGGLLHW
LLVVGGALVAWWGVRCGLGWFHPWLAWVWDVFLAYSLLCMRDLLVHGRRVLDALEDLPTA
RRRLGMLVGRDTAALPRDGIVRATIESLSENLTDGVLTPLWALCLFGLPGLIVVKAVSSL
DSMVGHKNARYQRFGWAGARSDDLAHWLPARLSVPLVAAAAALLRLHPGSAFRAAWRYHA
LLPSPNSGWSEAACAGALRVRLLGPIRYGGILVTEVYMGDPAWPADLDGADLRRALRLIR
VCDLLAVAIGLTLVPLRVLLPW
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggacctagtaggcgcccacttcgcgctcgtcctgatcgcttgcctgctcgatgccggg
ttcggcgatccggtttacccgctgcacccgatccgcttgctgggagtttggagcctggcg
tgggagcgacgactgttcgccgccggcctgaacggctatctgggcggcctcctgcattgg
ttgctggtggtcggcggtgccttggtggcctggtggggggtgcggtgtggtctgggctgg
tttcatccctggttggcctgggtctgggatgtgttcctggcctacagtctgttgtgcatg
cgcgatttgctggttcacggccggcgggtgctcgatgccctggaggatcttcccaccgcc
cggcgacgcttgggtatgttggtgggccgggatacggcggcgctgccgcgcgacggcatc
gtgcgcgccaccatcgaaagcctgtcggaaaacctgaccgacggcgtgctgaccccgctg
tgggctttgtgtctgttcggcctgccggggctgatcgtggtcaaggcggtgtccagtctc
gattccatggttgggcataagaatgcccgttaccagcgctttggctgggccggggcgcgt
tccgacgatttggcgcactggctgccggcccgcctgtcggtgccgctggtcgcggcggcg
gcggccttgctgcgcttgcatccaggatcggcgttccgggccgcgtggcgctatcacgcc
ctgctgcccagtcccaactcgggttggagcgaagccgcttgcgccggcgctctgcgggtg
cggctgctcgggccgattcgctacgggggaatattggttaccgaggtgtacatgggcgat
cccgcctggcccgccgacctggacggcgccgatctgcgtcgggccttgcggttgattcgg
gtctgcgatttgctggcggtggccatcggtctgacactggttccgctgcgcgtgttgctg
ccgtggtga
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