Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_14660
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Entry
IPM89_14660 CDS
T10208
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cbly03009
]
IPM89_14660 (rsmB)
Enzymes [BR:
cbly01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
IPM89_14660 (rsmB)
Ribosome biogenesis [BR:
cbly03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
IPM89_14660 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_25
MTS
Methyltransf_31
FtsJ
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QQS54050
LinkDB
All DBs
Position
complement(3246410..3247723)
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AA seq
437 aa
AA seq
DB search
MNARVIAAQALGRVLGEGESLATVLPSALEHANPGERGLLQELCYGVCRWQPRLQFLLDR
LLARPLAPGEPVVRGLLLAGLYQLWHLRVPEHAAVAETVAAVRPLRKPWAAGLVNAVLRN
ALRRRAELEALVEADAEARAAHPRWLLDWLRRDWPDDWPAIVAANNVRPPFTLRINRLRL
DREAYRQRLATAGCDTRPAAVETALTLSTPTDPATLPGFAEGWVSVQDAGAQLAAALLEA
RPGQRVLDACAAPGGKTGHLLECGPDLDLTALDCNAGRLERVRDTLARLRLSARLLVGDA
RRPADWWDGALYDRILLDAPCSATGVIRRHPDIKLLRRESDIAALAERQQALLTELWPLL
RPGGRLLYVTCSVLRAENERVVAAFLTAHPDAHEQPIMADWGRALPHGRQILPGEGGMDG
FYYAVLCQRATSPETEP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccgcgtcatcgcggctcaggcgctgggtcgggtattgggcgagggggaatcg
ctggccacggtgctgccgtcggcgctggagcacgctaatccgggcgaacgcggtttgctg
caggagctgtgttacggcgtctgccgctggcagccacggttgcagtttttgctcgaccga
ttgctggcgcgaccgctggcgccaggtgagccggtggttcggggcttgctgctggcgggt
ctctaccaattgtggcacttgcgcgttcccgaacacgccgcggtggccgaaaccgtcgcc
gccgtccgcccattgcgcaagccctgggcggcgggtctggtcaacgcggtgctgcgaaac
gcgctgcgccgccgggcggaactggaggcgctggtcgaggcggatgcggaagcccgtgcc
gcccatccgcgctggttgttggactggctgcggcgggattggccggacgactggccggcc
atcgtcgccgccaacaatgtccgcccgcctttcacgctgcggatcaatcgtcttcggctc
gatcgggaggcgtaccggcaacggctggcgacggcgggttgcgacaccaggccggcggcg
gtcgaaaccgcgctgaccctgtccactcccaccgatccggcgacattgccgggtttcgcc
gagggttgggtatcggttcaggatgccggcgcgcaactggcggcggcgttgctggaggct
cgaccggggcagcgggtgctggacgcctgtgccgcgcccggcggtaagaccgggcatctg
ctggaatgtgggccggacctcgatctgaccgcgctggattgcaatgccggccggctggag
cgggtgcgcgataccttggcccggctgcggctgagtgctcgactgcttgtgggcgacgcc
cggcggccggcggactggtgggacggcgcgctttacgatcgaattttgctggacgctccc
tgttcggcaaccggggtgatccgccgccatcccgatatcaagttgctgcgccgcgagagc
gatatcgccgcgctggccgaacggcagcaggcgttgctgaccgagttgtggccgctgctg
cggccgggtggccggctgctgtatgtcacctgctcggtgttgcgcgcggaaaacgagcgg
gtggtggcggcttttctcaccgcccatccggatgcccacgagcagccgatcatggcggac
tggggacgcgccttaccgcatggccgtcagattctgccgggcgagggcggcatggatggt
ttctattacgccgtgctatgccagcgggccacttccccagagacggaaccatga
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