Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_14995
Help
Entry
IPM89_14995 CDS
T10208
Name
(GenBank) L,D-transpeptidase family protein
KO
K16291
L,D-transpeptidase ErfK/SrfK
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cbly01002
]
IPM89_14995
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbly01011
]
IPM89_14995
Peptidases and inhibitors [BR:
cbly01002
]
Cysteine peptidases
Family C82
IPM89_14995
Peptidoglycan biosynthesis and degradation proteins [BR:
cbly01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
IPM89_14995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
Motif
Other DBs
NCBI-ProteinID:
QQS54111
LinkDB
All DBs
Position
3326186..3327382
Genome browser
AA seq
398 aa
AA seq
DB search
MPSPFLKRFHWLLLGWLTASTAQATVYPLPPPDIDVIGQVKVVYATKEDTLIDIARRYSL
GYDEIVHANPGVDRWAPGVGTPIVLPTRYVLPDTPRDGLVLNIAEMRLYYYPKAGADGQQ
VVLTYPVSIGRMDWKTPMGLTKIVAKNVDPAWRPPASIKAEHAAEGDFLPDVIPGGPDNP
LGRYAMRLGVPGYLIHSTNKPYGIGMRVTHGCVRMYPEDIERLFGMVPVGTPVRLVDQPV
KVGRFNGELYVESHEPLEEDNLPIKVTLEQAQRAIIAKIGPDMPGVDPAALEAAIEQVSG
MPVAVSALPGYGHAAPPPATAYPSTSTTTPPGYRPAYPRPVTGYAYSTPGMPPAGDPPAY
RPAPVNPTPYPGSTVPSTRPPTGDVPGTATQPRAATRF
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgccgagccctttcctgaaacgctttcactggctgttgctggggtggctgaccgccagc
accgcacaggcgaccgtttaccccctgccgcccccggacatcgacgtcatcggtcaggtc
aaggtcgtctacgccaccaaggaagacaccctgatcgatatcgcccgccgctacagtctg
ggctacgatgaaatcgtccatgccaacccaggcgtagaccgctgggcgccgggtgtaggt
actccgatcgtgctgccaacccgctatgtcctgcccgataccccgcgcgatgggttggtg
ctcaacatcgcggaaatgcggctgtactactatccaaaagccggtgccgatggacagcaa
gtggtcctcacttatccggtgagcattggtcgcatggactggaaaacgccgatgggcttg
accaagatcgtcgccaagaacgtcgatcccgcatggcgaccgccggcttcgatcaaggct
gaacacgccgccgaaggcgatttcctgcccgatgtgatccccggcggcccggacaatccg
ctgggacgctatgccatgcgattgggcgtgcccggctatctgatccatagcaccaataaa
ccctacggcatcggcatgcgggtcacgcacggttgcgtgcggatgtacccggaagacatc
gaacgactgttcggcatggtgccggtcggaacgccggtgcggttggtcgaccaaccggtc
aaagtcggtcgtttcaacggcgagttgtacgttgaatcgcacgaaccactggaagaagac
aacctgccgatcaaggtcaccttggaacaagcgcagcgggcgatcatcgctaaaattggt
cccgatatgccgggcgtggacccggcggcgctcgaagccgcgatcgaacaggtcagcggt
atgcccgttgcggtcagcgccttaccgggttacggccacgcggcgccaccgccggccacc
gcctatccgtccacatccaccaccacacctcccggataccgacccgcttaccctcgtccc
gtaaccggctacgcctactcgactccgggaatgccgccggctggagatccacccgcttac
cggccggctccggtcaatccaacaccctacccaggctccaccgttcccagtactcgccca
ccgaccggcgacgtgccgggcaccgcaacgcaacctcgcgcggcaacccggttttag
DBGET
integrated database retrieval system
