Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln: IPM89_16025
Help
Entry
IPM89_16025 CDS
T10208
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cbly Candidatus Competibacteraceae bacterium Lyne_18-Q3-R50-59_BATAC.383_cln
Pathway
cbly03030
DNA replication
cbly03430
Mismatch repair
cbly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IPM89_16025 (dnaX)
03430 Mismatch repair
IPM89_16025 (dnaX)
03440 Homologous recombination
IPM89_16025 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbly03032
]
IPM89_16025 (dnaX)
03400 DNA repair and recombination proteins [BR:
cbly03400
]
IPM89_16025 (dnaX)
Enzymes [BR:
cbly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IPM89_16025 (dnaX)
DNA replication proteins [BR:
cbly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IPM89_16025 (dnaX)
DNA repair and recombination proteins [BR:
cbly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IPM89_16025 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
AAA_16
RuvB_N
AAA_22
AAA_5
ResIII
TIP49
AAA_18
AAA_14
AAA_30
PIF1
AAA_2
AAA_19
Rad17
TsaE
nSTAND3
AAA_7
Mg_chelatase
DUF3646
MCPVI
SKI
TniB
AAA_assoc_2
DUF4434
Herpes_Helicase
Motif
Other DBs
NCBI-ProteinID:
QQS54270
LinkDB
All DBs
Position
3539085..3540668
Genome browser
AA seq
527 aa
AA seq
DB search
MSYQVLARKWRPRTFHELIGQEHVVRALTNALDQQRLHHAFLFTGTRGVGKTTIARIFAK
SLNCEVGVSSTPCGQCAACREIDAGRFVDLIEVDAASRTKVEDTRELLENVQYAPGRGRF
KVYLIDEVHMLSAHSFNALLKTLEEPPPPVKFLLATTDPQKLPVTVLSRCLQFNLKRLPV
SQIAGYLDQVLEREDVPREPAAVQLIARAGDGSMRDALSLLDQAIAFGGGRVEAAAVEAM
LGSIDRRRVVNLLRALATGEAQVVMRQVAELDELAPDYAVVLAELLSLLQQVALAQVLPD
AVPEDGVADPEDLRQLARALPPEDVQLFYQIALLGRRDLPLMPEPRGGFEMVLLRMLCFR
PAAREIAAPVLPEARPAPVPAVVPASRPASPATGASAQATSSEWGALVGQLKLTGIAKQV
AMNCALIERQGNDFRLALEPGHAQLFNKSIEDRLKAALEQQLGAPVGLRIQVGGAVEDTP
ARQRFQQQAERQQVVAEQIAQDPHVRDMQKTFGAQIVAVHPLDETDG
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggttctggcccgcaaatggcgcccccgtacctttcacgaattgatcggc
caggagcatgtggtccgcgcgttgaccaacgcgctcgaccagcagcgactgcaccacgcc
tttctgtttaccggcacgcgcggagtgggcaaaaccaccatcgcccggattttcgccaag
tcgctgaactgcgaggtcggcgtgtcctccacgccttgcggacagtgtgccgcttgccgg
gaaatcgatgccggccgcttcgtggacctgatcgaggtcgatgccgcctcccgcaccaag
gttgaggatacccgcgaactgctggagaacgtgcagtacgcgcccggccggggtcgcttc
aaggtatacctgatcgatgaagtccacatgttgtccgcgcacagcttcaatgcattgttg
aagaccttggaggagccgccgccgcccgtgaaattcctgctggcgaccaccgatccgcag
aagctgccggtcacggtcctgtcgcgctgcctccagttcaacctcaagcgcttgccggtg
agccagatcgccggatatctggatcaggttttggaacgcgaggatgtccctcgtgagcca
gcggcggtgcagcttatcgcccgcgccggcgacggcagcatgcgcgatgccttgagccta
ttggatcaggcgattgctttcggtggtggtcgggtggaagcggccgcggtcgaggccatg
ctcggcagtatcgatcggcggcgggtggtgaacctgctgcgggcgctggcgaccggcgag
gcgcaggtggtgatgcggcaggtcgccgaactggacgaactggccccggactatgcggtg
gtgctggccgaactgctatcgctgttgcagcaggtggcgctggcgcaggtgctgcccgat
gccgtgccggaggatggcgtggccgacccagaggatctgcggcaattggcgcgggccttg
ccgccggaggatgtacagttattctatcaaattgccttattgggccggcgcgatctgcca
ttgatgcccgaaccgcgcggcggcttcgaaatggtgttgctgcggatgctgtgtttccgg
ccggcggctcgggaaatcgcggcgccggttctgcccgaagccaggcccgctccagtaccg
gccgttgtgcccgcttcgcggcccgcttcgccggcgactggcgcttcggcccaagcgact
agctcggaatggggtgctctggtcgggcaacttaaactgaccggcatcgccaagcaggtg
gcgatgaattgcgccttgatcgagcggcagggtaacgattttcggttggccctggaaccc
ggtcatgcccagttgttcaacaaatcgattgaggatcggttgaaagcagcgctggagcaa
caacttggcgcgccggttggtttgcggattcaagtgggcggcgcggtggaggacacccca
gcccgccagcggttccagcaacaggcggaacgacagcaagttgtcgccgagcagatcgct
caggacccgcatgtgcgggatatgcagaaaacgttcggtgcgcaaatcgtggcggtccat
ccgctggatgaaaccgacggctga
DBGET
integrated database retrieval system
