Clostridium botulinum F 230613: CBF_0188
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Entry
CBF_0188 CDS
T01865
Symbol
spoIID
Name
(GenBank) stage II sporulation protein D
KO
K06381
stage II sporulation protein D (peptidoglycan lytic transglycosylase) [EC:
4.2.2.29
]
Organism
cbm
Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbm01011
]
CBF_0188 (spoIID)
Enzymes [BR:
cbm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CBF_0188 (spoIID)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbm01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CBF_0188 (spoIID)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SpoIID
Motif
Other DBs
NCBI-ProteinID:
ADF98000
LinkDB
All DBs
Position
189785..190861
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AA seq
358 aa
AA seq
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MRRLNRYTNINKLVITIISTVCIMLILSFALSFSGNKEQKVRETISKVKLDQKRQEEKID
INKKYKVKSEPQVRVYFVNEKVVRSIPLEEYVKGVVSAEMPAEFHIEALRAQAVAARTYA
LAHMKGFGENQYNKRINADVCDSVQSQVFMPKDKRIKSWPKEKRNEYWNKIEESVNSTKG
NVLVYNNEIVMAPYYFATSNGKTEDSENVFSSEVPYLKSVESPGEEKAPKFKSSKKISYD
QFIKIIKTQYPKCTINKKDINKKIIIKDKTESGSIKKIKIDNIEIKGTEFRKILGLNSSK
FSLEFKDNYLIVNCNGYGHNVGMSQWGANSMGKSGKKYDYILKHYYKGVNMEILKYSD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgagaagattaaatagatatactaatattaataagttagttataacaattataagtact
gtgtgtattatgttaattttaagttttgctttgtcctttagtggaaacaaagaacaaaaa
gttagggaaactataagtaaggttaagttagatcagaaaagacaagaagaaaagattgat
ataaataaaaaatataaagtaaaatcagaacctcaagttagggtttactttgttaatgaa
aaagtggtaagatcaatacccttagaggaatatgtaaagggcgttgtttcagctgaaatg
ccagcggagtttcatatagaagcattgagagctcaagcagtagcggctagaacttatgct
ttagctcatatgaaagggttcggtgaaaatcaatataataaaagaataaatgcagacgtg
tgtgatagtgttcaatctcaagtttttatgcctaaggataaaagaataaaatcttggcca
aaggaaaagagaaatgaatattggaacaaaatagaagaaagtgttaatagcactaaaggg
aatgtacttgtatataacaatgaaatagttatggctccatattattttgctactagtaat
ggaaaaacagaagatagtgaaaatgtatttagtagtgaagttccttatttaaaaagtgta
gaaagtccaggagaagagaaggctcctaaatttaagagtagcaaaaaaatttcttatgat
caatttataaaaattataaaaactcaatatcctaagtgtaccataaataaaaaagatata
aataaaaaaataataataaaggataaaacagaaagtggtagtattaaaaaaattaaaata
gataatatagaaattaaaggtacagaatttagaaaaatattaggcctaaattcatctaaa
ttttcattagaatttaaagataactatcttatagtaaattgtaatgggtatggtcataat
gttggaatgagtcaatggggggcaaatagtatgggtaaatcggggaaaaaatatgattat
atacttaaacattattataaaggagtaaatatggaaattctcaaatatagtgattaa
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