Clostridium botulinum F 230613: CBF_0297
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Entry
CBF_0297 CDS
T01865
Name
(GenBank) exonuclease, DNA polymerase III, epsilon subunit family
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbm
Clostridium botulinum F 230613
Pathway
cbm03030
DNA replication
cbm03430
Mismatch repair
cbm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBF_0297
03430 Mismatch repair
CBF_0297
03440 Homologous recombination
CBF_0297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbm03032
]
CBF_0297
03400 DNA repair and recombination proteins [BR:
cbm03400
]
CBF_0297
Enzymes [BR:
cbm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBF_0297
DNA replication proteins [BR:
cbm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBF_0297
DNA repair and recombination proteins [BR:
cbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBF_0297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADF98095
LinkDB
All DBs
Position
309553..310482
Genome browser
AA seq
309 aa
AA seq
DB search
MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMRFMPINIGIHGIRPHM
VQDELEFDKIWGKIKGYFNNNLVIAHNASFDMSVLRSTLKLYNIKMPSFEYICTMKLSKN
FYSNIDNARLNTVNNFLGYKFKHHDALADAMACSNILINISKELNSKDINEISKLIGVTL
GYVNENGYKPSSTKGRILKRSNRQAPKENKKIIESFNFTSFKEEVVVFTGGLASMTRNEA
MILVGKLNGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLNEE
AFLQKCKEK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtagctatagattttgaaactgctaatgaaaaaagaaatagtccatgctct
ataggtatcgtggttgtgaaagatggggagattgtagaaaaagtacattatttaataaag
cctaaggaaatgagatttatgccaataaatattggaattcatggaataaggccgcatatg
gtccaggatgaattagaatttgataaaatatggggaaaaattaagggctattttaataat
aatttagtaatagctcataatgcttcctttgatatgtctgtattaaggagtacattaaaa
ctttataatataaaaatgccaagttttgagtatatatgtacaatgaagctttctaaaaat
ttttatagtaacattgataatgcaagattaaatacagtaaataattttttggggtacaag
tttaaacatcatgatgctctggcagatgcaatggcatgtagtaatattttaattaatata
tcaaaggaattaaattcaaaggatattaatgaaatatcaaaattaattggagtgacttta
ggatatgtaaatgaaaatggatataaaccatcttccactaaaggaaggatcttaaaaaga
tctaatagacaagctccaaaggaaaataaaaagataatagaaagctttaatttcacttca
tttaaagaagaggttgttgtatttacaggtggattagcttctatgacaagaaatgaagca
atgatattagttggaaagcttaatggaactgttggaagttccgtaactaagaaaacaaca
tacttagttacaaatacaaaggatatagaggatttaaatagagaagaaatgagcaataag
cttaagaaagccatagatttaaagaaaaaaggtcaaaatataaagtttttaaatgaggaa
gcattcctacaaaaatgtaaagaaaaataa
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