Clostridium botulinum F 230613: CBF_0490
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Entry
CBF_0490 CDS
T01865
Symbol
addA
Name
(GenBank) recombination helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cbm
Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbm03400
]
CBF_0490 (addA)
Enzymes [BR:
cbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBF_0490 (addA)
DNA repair and recombination proteins [BR:
cbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CBF_0490 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_30
Cullin_Nedd8
Cystatin
ResIII
Motif
Other DBs
NCBI-ProteinID:
ADF98272
LinkDB
All DBs
Position
533561..537400
Genome browser
AA seq
1279 aa
AA seq
DB search
MSGTKWTDEQRQAIFTKNCNLLVVAGAGAGKTAVLVQRIIEKILDKEEPIDIDKLLVVTF
TNAAAAEMRERIGDAISKGLDEDPESKVLRKQLTLLNKSNIMTIHSFCLQVIKNNFHTME
IDPNFRICDETEGILMKQEAIDELFDELYEIENEDFINLVESYASRKDTRLQEVVLELHR
FAKSAPFPYTWLLNMAEGFNVGENFNFEETLWADMIMEDMKVLLHGFKNMLQQSIDVILN
SEGIDYYYEPFKMDLSFINSLLEKSSFKEFRGEIIAYDFPKLPLKRNKDADKEAKERVKK
LRDKVKKKIVELKNILDSYENEFIKKEFIFLYPSMKALSNLVILFDKKYEAKKRERDLID
FNDIEHLCLSILTDKNSDGHIIPSDIALNYRKKFAEVLIDEYQDSNLVQEVIMSMVSRVK
GYWSFYNGQLIFNEEEINLEEPQIGLDIPNRFMVGDVKQSIYRFRQAKPEIFLDKYNEYN
EEEDRKNRKVKLFKNFRSREEVINGVNYLFKQIMSKTIGELDYTEEEALKVGASYGEEVK
GEPIELCLMDKKYEISEEVLKEYNVDEEEALDNIQLEGRLVAKKIQKLVGNNLEGGLKVF
DKKLGEYRNLQYRDIVILMRATSNWAPVFVEELAKEGIPVFADTNSGYFDTAEIKTMISL
LQIIDNPLQDIPLLSVLRSPIASFTDDELIDIRMINKNITFYECMEIIYRLYKNEKLDSY
YSFYIEDENKINKIIKDMNEKLKNKICSFIEKLKLWREKSIHIDIDEFIWFLYVETGYYG
YAGALQAGEQRQANLRILFQRAKQYAKTSYKGLFNFINFINKLKFSSGDMGSAKILGENE
NVVRIMSIHKSKGLEFPVVILSGTGKNFNMTDLNKNILFHRDLGYGPDYVDTERRIAYPS
LVKNIIKNKIRLETLSEEMRILYVALTRAREKLIITGLINNMDKTVEDWLNLSEDKNKVP
EYAVMSGKTYLDWIGPALIKHKDAVSFREELKMTSELSNIVDDKSKWKIELWNKRELLKE
KVEEDEVEISEKIKETLMNLEESNYKEEIYKRLSFKYKYDNASSIPTKLSVSDVKKQFIL
DEKENTEELFKKLELRKPMFMEEKKKISPSERGTIIHLFMQHLDLKKAESEEDIKEQINR
LIEREFITYEQSKVISPYKILKFCRGELGKRILNSNNVNKEMPFSIEIPALEIYKELDKE
IYKDEKLIIQGVIDCYFEEEDGLVLLDYKTDYVNDIEEIKNRYEIQIKYYEEALNRITGK
NVKDKYLYLFSVDNYIKID
NT seq
3840 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcactaagtggacagatgagcaaaggcaggctatttttactaagaattgcaac
ttgcttgtggtagcaggggctggggctggtaagactgctgttttggttcaaagaataatt
gaaaaaatattggataaagaggaacctatagatatagataaattattggtagttactttt
actaatgcagctgccgcagaaatgagagagagaataggagatgctatttctaaaggctta
gatgaagacccagagtcaaaggtactaagaaagcagcttactttattaaataagtcaaat
ataatgactattcactccttttgtcttcaagttataaaaaataattttcatactatggaa
atagatcctaattttagaatatgtgatgaaacagaaggaatacttatgaaacaagaagct
atagatgagctttttgatgagttatatgaaatagagaatgaagattttattaatctagta
gaaagctatgccagtagaaaggatactagattacaagaagtggttttagagttacatagg
tttgctaaaagcgcaccattcccttatacttggcttttaaatatggcagagggatttaat
gtgggggaaaattttaattttgaagaaacactgtgggcagacatgattatggaggatatg
aaggtattattacatggatttaaaaatatgctacaacaatctatagatgtaatattaaat
tcagagggtatagactattattatgaaccctttaaaatggatttgagttttataaatagt
ttacttgaaaaatcaagttttaaagaatttagaggtgaaataatagcttatgatttccct
aaattgcctttaaagagaaataaggatgcggataaagaggctaaggaaagggttaaaaaa
ttaagggataaggtaaagaaaaagatagtagagcttaaaaatatattagattcctatgaa
aatgaatttataaagaaggaatttatatttttatatccttcaatgaaagcactatccaat
ttagtaatactatttgataaaaaatatgaagccaaaaaaagagaacgagatttgattgat
tttaatgatatagagcatttatgtttatccatattaacagataagaatagtgatgggcat
ataattccatcagatattgctttaaattatagaaaaaaatttgcagaagtacttatagat
gaatatcaagatagtaatttggtacaagaagttattatgagtatggtatctagagtaaaa
ggatattggagtttttataatggacaattaatatttaatgaagaagaaataaatttagaa
gaacctcagataggcttagatattcctaatcgatttatggtaggagatgtaaaacaaagc
atatatagatttaggcaggcaaaacctgagatatttttagataaatataatgagtataat
gaagaagaagatagaaagaatagaaaagttaagctctttaagaactttagaagcagggaa
gaagtaattaatggtgtaaattatttatttaaacaaataatgtctaaaactataggggaa
ttagattatacagaggaagaggccttaaaagttggggctagctatggagaagaggtaaaa
ggtgaacctatagaattatgtttgatggataaaaagtatgaaataagtgaagaagtatta
aaagaatataatgtggatgaagaagaagctttagataatatacaattagagggaagatta
gtagctaaaaaaatacaaaaattagtgggaaataatttagaaggtggattaaaggtattt
gataaaaagttaggagagtacagaaaccttcaatatagagatatagtgattcttatgaga
gctacatctaactgggcaccagtatttgtagaggagcttgcaaaggaaggcataccagtt
tttgcagatacaaattcaggctattttgatacagcagaaataaaaactatgatatcttta
ttacaaataatagataatcctctgcaagacataccattgctttcagtattaagatcccct
atagcttcttttacagatgatgaacttattgacataagaatgataaacaaaaatataacc
ttttatgaatgtatggaaataatatatagattatataaaaatgaaaagttagattcttat
tatagtttttatattgaagatgaaaataagataaataaaataataaaagatatgaatgag
aaattaaaaaataaaatatgtagttttatagaaaaattaaagctatggagagagaaatct
attcatatagatatagatgaatttatatggtttttatatgtggaaactggatactatggg
tatgcaggagcgcttcaagcaggagagcaaagacaggctaatttaaggatacttttccaa
agggcaaagcaatatgcaaaaactagttacaaaggattgtttaactttataaattttata
aataaattaaaattcagtagtggagatatgggcagtgcaaaaatacttggagaaaatgaa
aatgtagtaagaataatgagtattcataagagtaaaggattagaatttccagtagttata
ctaagtggtactggaaagaattttaatatgacagatcttaataaaaatatattatttcat
agagatttaggatatggaccagattatgtagatacagaaagaagaatagcttatccatcg
ttagttaagaatatcataaaaaataaaataagattagagactctatcagaagagatgcga
atattatatgtagctttaacaagggcaagagaaaaacttataataacaggattgataaat
aatatggataaaactgtagaagactggttgaatttatcagaggacaaaaataaagtacca
gaatatgctgttatgagtggaaaaacttatttagactggataggtccagctcttataaaa
cataaggatgctgtaagttttagagaagagttaaaaatgacatcagagctttctaatata
gtagatgataagtcaaaatggaaaatagaattatggaataaaagagaattattaaaggaa
aaggttgaagaggatgaagtggaaattagtgaaaaaataaaagaaacattaatgaattta
gaagaaagtaattataaagaagaaatatataaaagactttcctttaagtacaaatatgac
aatgcttcaagcataccaacaaaattgtcagtttcagatgtgaaaaaacaatttatatta
gatgagaaggaaaatacagaggagttatttaaaaaactagaacttagaaaacctatgttt
atggaagaaaaaaagaaaatatctccttcagagagaggtactattatacacttatttatg
caacatttagatttgaaaaaggcagaaagtgaagaggatataaaagaacaaataaatagg
ctaatagaaagagagttcataacctatgagcaatcaaaggttataagtccatataaaata
ttaaaattttgtagaggtgaactaggcaaaagaatacttaattctaataatgtaaataaa
gaaatgcctttttctatagaaatacctgcattagaaatttataaagagttagataaagaa
atatataaagatgaaaaattaataattcaaggggtaatagactgttattttgaggaagag
gatggattagtattattagattataaaacggattatgttaatgacatagaagaaataaag
aatagatatgaaatacagattaaatattatgaagaagccttaaatagaataacaggaaaa
aatgtaaaagataaatatttatatttattttctgtagacaattatataaaaattgattga
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