Clostridium botulinum F 230613: CBF_0559
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Entry
CBF_0559 CDS
T01865
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cbm
Clostridium botulinum F 230613
Pathway
cbm00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CBF_0559
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cbm01007
]
CBF_0559
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbm03016
]
CBF_0559
Enzymes [BR:
cbm01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
CBF_0559
Amino acid related enzymes [BR:
cbm01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
CBF_0559
Transfer RNA biogenesis [BR:
cbm03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CBF_0559
Prokaryotic type
CBF_0559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
HOOK
Vps5
FapA
TMF_TATA_bd
GreA_GreB_N
CCDC113_CCDC96_CC
NET2A
DUF4404
DUF4407
Motif
Other DBs
NCBI-ProteinID:
ADF98336
LinkDB
All DBs
Position
613042..614319
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AA seq
425 aa
AA seq
DB search
MLDLKFVRENPEVVKENIRKKFQHNKLELVDKVIALDAELRNIKPEADNLRAKRNKISKQ
IGGLMAQGKKGEAEELKKQVTVASDHLAELEKRESELEEKIKKIMITIPNIIDPSVPIGK
DDSENVEIQRYGEPVVPDFEVPYHTEIMEKFNGIDLDSARKVAGNGFYYLMGDIARLHSA
VISYARDFMINRGFTYCIPPFMIRSEVVTGVMSFAEMDSMMYKIEGEDLYLIGTSEHSMI
GKFIDTISPETSLPQTLTSYSPCFRKEKGAHGIEERGVYRIHQFEKQEMIVVCKPEDSVI
WYDKLWQNTVDFFRSFDIPVRTLECCSGDLADLKVKSVDVEAWSPRQKKYFEVGSCSNLG
DAQARRLKIRVAGENGKYFAHTLNNTVVAPPRMLIAFLENNLNEDGSVNIPVPLQPYMGG
MTVIK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttaaaatttgtaagagaaaatccagaagttgttaaggaaaacataaggaaa
aaatttcaacataataagctggagttagtagataaagtaatcgctctagatgctgaactc
agaaatataaaaccagaagcagataatttaagagctaagagaaataagatttcaaaacaa
atcggtggattaatggctcagggaaaaaaaggagaagcagaagaactaaagaaacaggtt
acagtagcctcagatcatttagctgagttagaaaaaagagaaagcgaactggaagaaaaa
ataaaaaaaattatgattactattccaaatattattgatccaagtgttcctattggtaaa
gatgatagcgagaatgtggaaattcaacgatatggtgaaccagttgtgccagatttcgag
gttccttatcatactgagattatggagaaatttaatggaattgatttggatagtgctaga
aaagttgccggtaatggtttttattatttgatgggagatattgctagactacattctgca
gtgatttcttatgccagagactttatgattaaccgtggttttacatattgtattccacct
tttatgattcgtagtgaagttgtgactggtgttatgagctttgcagaaatggattctatg
atgtataaaatagaaggtgaagatttatatttgatcggaaccagtgaacattctatgatt
ggtaaatttattgatacaatatcaccagaaacttctttgccacaaacattaactagttac
tcaccttgctttagaaaggaaaaaggagctcatggtattgaagaaagaggagtatataga
attcatcaatttgaaaagcaggaaatgattgttgtatgtaaaccggaagatagtgtaatt
tggtatgataagctatggcagaatacagtagatttttttcgctctttcgatattcccgta
agaactttggaatgctgttctggtgacttggcagatttaaaagtaaaatcagttgatgta
gaagcttggtcccctagacagaaaaaatacttcgaggtaggaagttgctctaatttaggt
gatgcacaagcacgccgtcttaaaattcgtgtagctggtgagaatggtaaatactttgcg
cacacattaaacaataccgtagttgcacctccaagaatgctaattgcttttttagagaac
aacttaaatgaagatggctctgtcaatattccagttccattacagccatatatgggtgga
atgactgtcattaaataa
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