Clostridium botulinum F 230613: CBF_1701
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Entry
CBF_1701 CDS
T01865
Name
(GenBank) sensory box sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cbm
Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbm03000
]
CBF_1701
Transcription factors [BR:
cbm03000
]
Prokaryotic type
Helix-turn-helix
Other families
CBF_1701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_8
GAF
AAA_5
PAS_8
AAA_2
PAS
PAS_4
PAS_9
HTH_50
Mg_chelatase
AAA_3
HTH_30
AAA_16
AAA
Diguanyl_cycl_sensor
Phage_CP76
IclR_C
Motif
Other DBs
NCBI-ProteinID:
ADF99415
LinkDB
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Position
1834536..1836446
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AA seq
636 aa
AA seq
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MIYGKEKQDNIIKKSHERSVYFGIEENRVFPKKILKGKEITNNIEKNKSFLKVASPFIDI
LYDFLKGSEFFIILTDKEGCILKIIGDKEVMDIANNLNMVVGAFMSENSIGTNAMGTAIK
EDIPIQISEREHFIKAYHRWTCSAAPIHDINGDIIGCLNLTGDRDRVHSHTLGLVVAAVK
SIENQINVDNTNKKLLETYQYMNTIVDSISSGIYVVDFRGKIKTINKAACNILGIEDKDV
LDKNVENILPNWHHIFERIKNGKPYEDKEAVLNDKLIKGRYNVSATPIQIENKIIGMVIV
FKEIKTVLDLVNKYSGMRAVYNFEDIIGESKEIKKVINYAKSISSSPSTVLIEGESGTGK
ELLAQSIHNYGDRRENSFIALNCGAIPKSLIESELFGYEDGAFTGARRGGHAGKFELANG
GTLFLDEIGEMPLDMQVSLLRVLQEGYVTRVGGDKVIPVDVRIIAATNKDLKKEVEKGTF
RQDLYYRLSVIPIKLPPIRERKGDLPILIKYFFRIKSIKLNKPMPHIKEDIYHNMLQYNW
PGNIRELENFIENIVNLRGDSSFMLEEDFKNIEDKHNFHENNIGLLYSNKIRTLEEIEKE
AIINTVNEYNRNMSQSAKALGITRATLYSKLKKYNI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
ttgatttatggtaaagagaaacaagataatataataaaaaaatctcatgagagatctgtt
tattttggaatagaggaaaatagagttttccctaaaaaaattcttaaagggaaagaaatt
accaataatatagaaaaaaataagagttttttaaaggttgcatctccttttatagatata
ttatatgattttttaaaagggtcagagttctttataattttaacagataaagaaggatgt
attttaaaaattattggagataaagaagtaatggatattgctaataatttaaatatggta
gtgggagcatttatgtcagaaaatagtattggtaccaatgctatgggaacagctataaag
gaagacatacctattcaaatatctgaaagggaacattttataaaggcttatcacaggtgg
acctgctctgcagcccctatacatgatataaatggagacataataggatgtttaaattta
actggagatagggatagggttcattctcacactttaggattagttgtagcagctgttaaa
tctatagaaaatcaaataaatgtagataatacaaataaaaaattattagaaacttaccaa
tatatgaatactatagtagactcaatatcttcaggaatatatgtggtggattttagagga
aagattaaaacaataaataaagccgcctgtaatattcttggaattgaagataaggatgta
ttagataaaaatgtagaaaacatattacccaattggcatcatatatttgaaagaattaaa
aatggtaaaccatatgaggataaggaagcagttttaaatgataaattgattaagggaaga
tataatgtttctgctacaccaatacaaatagaaaataaaataataggaatggttattgtt
tttaaggaaataaaaactgtgttagacttagttaataaatatagtggtatgagagctgtg
tataactttgaagatattataggtgaaagtaaagagataaaaaaggtaataaattatgcc
aaaagtataagttcatctccatctactgtattaattgaaggagaaagtggtacaggaaaa
gaattattggcacaatcaattcacaattatggtgatagaagagaaaacagttttatcgct
ttaaattgtggagctatacctaaaagtttaatagaaagcgagctttttggatatgaagat
ggagcttttacgggagcaagaagaggtggacatgcaggcaaatttgagttggctaatgga
ggaactttatttttagatgaaattggagaaatgcctttagatatgcaagtgagtttactt
agagttttgcaagaaggatatgtaacaagagtcggtggagacaaagtaatacccgtagat
gtaagaattattgctgctactaataaagatttaaaaaaggaagtagaaaaggggaccttt
agacaagatttatattatagattaagtgtaatacctataaaattacctcctattagagaa
agaaaaggagatttgcccatacttattaaatatttttttaggattaaatctataaaatta
aacaaaccaatgcctcacataaaggaagatatatatcataatatgttacagtataattgg
ccaggtaatataagggaactggaaaattttatagagaatatagttaatttaaggggagat
agttcttttatgttggaagaggattttaaaaatattgaggataagcataattttcatgaa
aataatatagggcttttatatagtaataaaataagaaccctagaggaaattgaaaaagaa
gctattataaatacagtgaatgaatataataggaatatgtcacaaagcgcaaaggctctt
ggtataactagggctaccctatattcaaaacttaagaaatataatatttaa
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