Clostridium botulinum F 230613: CBF_1961
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Entry
CBF_1961 CDS
T01865
Symbol
truA-1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cbm
Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbm03016
]
CBF_1961 (truA-1)
Enzymes [BR:
cbm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CBF_1961 (truA-1)
Transfer RNA biogenesis [BR:
cbm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBF_1961 (truA-1)
Prokaryotic type
CBF_1961 (truA-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7249
Motif
Other DBs
NCBI-ProteinID:
ADF99649
LinkDB
All DBs
Position
2092430..2093170
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AA seq
246 aa
AA seq
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MTNIKLYIQYDGSKYNGWQKQKENDNTIQGKIENVLSLMTGEDINLIASGRTDTGVHANM
QVANFHTTFQGSTDEILSYCYEYLPKDIVVYDAFHVDERFHSRLNVKKKKYTYKICNKKF
HDVFSRKYSYHVPETLDIEAMKEACTYLVGRHDFASFTAARSKKKSTVRTLYSIDIIKKD
GYVNLVYLGSGFLHKMIRILTGTLIEVGLHNLKSVDCKNILKAEDRRKAGPTAPSQGLFM
TSVDYE
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgactaatataaaattatatatacaatatgatggttccaaatataacggttggcaaaaa
caaaaggaaaatgacaatactattcaagggaaaattgaaaatgtactttcacttatgaca
ggagaagatataaacctaatagcttctggtagaacagatacaggcgtacatgcaaatatg
caggtagccaattttcatacaacttttcaaggttctacggatgaaatattaagctattgc
tatgaatatttacctaaagatattgtagtttatgatgcttttcatgtggatgaaagattt
cactctagattaaatgttaaaaagaaaaagtatacctataagatttgtaataaaaaattt
catgatgtattctctaggaaatactcttatcatgtaccagaaactctagatatagaggct
atgaaagaagcttgtacttatttagtaggaagacatgattttgcatcatttaccgcagca
agatcaaaaaagaaatccactgtaagaactctttatagcatagatattataaaaaaggat
ggctatgtaaacttagtatacttaggcagtggatttttacataaaatgataagaatatta
acaggtactcttatagaagtaggattacacaatctaaaatctgtagattgtaaaaacata
ctgaaggcagaagatagaagaaaagcaggacctactgctccaagtcaaggattatttatg
acaagtgtagattatgaatag
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