Clostridium botulinum F 230613: CBF_2483
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Entry
CBF_2483 CDS
T01865
Symbol
topA
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cbm
Clostridium botulinum F 230613
Brite
KEGG Orthology (KO) [BR:
cbm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbm03032
]
CBF_2483 (topA)
03400 DNA repair and recombination proteins [BR:
cbm03400
]
CBF_2483 (topA)
Enzymes [BR:
cbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CBF_2483 (topA)
DNA replication proteins [BR:
cbm03032
]
Prokaryotic type
DNA Topoisomerases
CBF_2483 (topA)
DNA repair and recombination proteins [BR:
cbm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBF_2483 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Zn_ribbon_GRF
Toprim_4
HypA
DUF2621
Motif
Other DBs
NCBI-ProteinID:
ADG00139
LinkDB
All DBs
Position
complement(2618087..2620189)
Genome browser
AA seq
700 aa
AA seq
DB search
MGQKMGQNLVIVESPAKAKTIKKYLGKNYVVEASMGHVRDLPKSQLGVDIENNYDPKYIT
IRGKGELLDKLRKEAKRSSKVYLATDPDREGEAISWHLAHVLKIDESEECRIEFNEITKT
SIKKAIKSPRRINENVVDAQQARRVLDRLVGYKISPILWSKVKWGLSAGRVQSVALRMIC
DREREIEEFIPKEYWTIECEVYKEKNKKPFIIKLTTKSGKKIEINNEEEAIEAIQDLKKG
EFIVKKIKKTKKNKNPLAPFTTSTLQQDSYKKLNFSTKKTMSIAQQLYEGIDIKGFGAVG
LITYMRTDSIRISEEAQKSTLEHIKSNFGEEYIPKTPRVFKGKKNIQDAHEAIRPTNIEI
TPTLAKESLTPQQYKLYELIWKRFVASQMASCILDSTSISIENGKYGLRASGSLIAFDGF
MKVYEYSTEEEKDSIKIPELEENEVLKEKSINKSQHFTQPPARYSEASLVKTLEENGIGR
PSTYAPIISTILDRKYVEREKKTLKPTELGDIVNNILSEYFKQIVDLEFTADMENKLDYI
EEGKKSWREVVNDFFQPLIESIEIAEKEIAKITIEDKVTDVVCEKCGRNMVIKHGRYGDF
LACPGYPDCKNTKPIVEEIDVKCPKCGDGKVLIKKSRKGRKFYGCSNYPDCDFVSWSEPV
KEKCEECGSYMVKKQSKAKGEYYECANSECKHRKYLNNKE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggacaaaaaatgggacaaaatttagtaatagtagaatcaccagcaaaagctaaaacc
ataaagaagtatttaggaaaaaactatgtagttgaggcctcaatgggacatgtaagagat
ttacctaaaagtcaattaggtgttgatatagaaaataattatgatcctaagtatataaca
ataagaggaaaaggcgaacttttagataagcttagaaaagaagctaaaagaagctctaaa
gtatatttagcaacggacccggatagagagggagaagctatttcttggcatttagctcat
gttttaaaaatagatgagagtgaagaatgcagaatagaatttaacgagataactaaaact
tctataaagaaagcaatcaaatctccgagaagaataaatgaaaatgtagtagacgcgcag
caagcaagaagggttttggatagattagttggatataaaataagccctatattgtggagc
aaggttaaatggggattaagtgcaggtagagttcaatctgtggctttaagaatgatatgc
gatagagaaagagaaattgaagaatttataccaaaagaatattggactatagaatgtgag
gtatataaagaaaaaaataaaaaacctttcataataaaattaactactaaatcagggaaa
aaaatagagataaataatgaagaggaagctattgaagcaatacaagacttaaaaaaaggt
gaatttatagtaaaaaaaataaagaagacaaagaaaaataaaaatcctttagcacctttt
actacgagtactcttcaacaggattcttataaaaaattaaatttttctactaaaaagact
atgtctatagctcaacaactatatgaaggtatcgatatcaaaggttttggtgcagtaggt
cttataacctacatgagaacagattctataagaatatcagaagaagctcaaaaatcaacc
ctagagcatatcaaaagtaattttggggaagaatatataccaaaaactccaagagttttt
aaaggaaagaaaaatatacaggatgcccatgaagctataagaccaaccaatattgaaata
actcctacacttgctaaggaaagtttaacgcctcaacaatataaattatacgaattaata
tggaaaagatttgtagcaagccaaatggcttcttgtattttagattcaacatctataagt
atagaaaatggaaaatatggattaagagctagtggatccttaatagcttttgatggtttt
atgaaggtgtatgagtactctacagaggaagaaaaagatagtataaaaatacctgaattg
gaagagaatgaggttttaaaagaaaaatctataaacaaaagccaacattttactcaacca
ccagctaggtattctgaagcttctttagtaaaaactttagaagaaaatggtataggaagg
ccaagtacttatgctcctattatatctactatattagatagaaaatatgtagaaagagag
aaaaaaacattaaagcctacagaactaggagatatagtaaataatatactaagtgaatat
tttaagcaaatagtagatctagaatttacagcggatatggaaaataagctagattatata
gaagaaggaaaaaaatcttggagagaggttgtaaatgatttctttcagccattgatagaa
tccatagaaatagcagaaaaagaaatagcaaaaataactattgaagataaagtaacagat
gtggtatgtgaaaaatgtggaagaaatatggttataaaacatggaagatatggagacttt
ttagcatgtccaggatatccagattgtaaaaataccaaacctatagtagaagaaatagat
gttaagtgtcctaaatgtggagatggaaaagtcttaataaagaaaagtagaaaaggcaga
aagttttatggatgcagtaactatccagactgtgattttgtaagttggtcagaacctgtg
aaagaaaagtgtgaagaatgtggaagttacatggtaaaaaaacaaagtaaagctaaaggt
gaatactatgaatgtgctaattcagaatgtaagcatagaaaatatttaaataataaagag
taa
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