Entry |
|
Name |
(GenBank) putative 8-oxoguanine DNA glycosylase
|
KO |
|
Organism |
cbm Clostridium botulinum F 230613
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cbm00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CBF_3455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cbm03400]
CBF_3455
Enzymes [BR:cbm01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CBF_3455
DNA repair and recombination proteins [BR:cbm03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CBF_3455
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(3606048..3606965)
|
AA seq |
305 aa
MDFNYIENYTDGIVIKDVRNFELAHIFECGQCFRWYKTEEGSYIGVAYGKVIEVEKANND
VILHNATEDDFKNIWAEYFDLYRDYSEIKNILSKDEILAKSVEFGHGIRLLKQDPFEIIV
SFIISANNRIPMIKKAIKNISERWGDPIEYKGNIYYSFPTVEQLKDATEDELKACSVGFR
AKYIKDTVNKIYQNSIEECEQYEKEYDMLWIKNQQDDICHKVLQNYSGIGAKVADCVMLF
SMEKYSAFPVDVWVKRAMQYFYLAPDVSLKKIRDFGREKFGELSGFAQQYLFYYARENKI
DVNQE |
NT seq |
918 nt +upstreamnt +downstreamnt
atggattttaattatatagaaaattatacagatggtatagttattaaagatgtaagaaac
tttgaattagcacatatttttgaatgtggtcaatgtttcagatggtacaaaacagaagag
ggttcttatataggagtagcttatggaaaggttatagaagtagaaaaagcaaataatgat
gtaatattacataatgctacagaagatgattttaaaaatatttgggcagaatattttgat
ttatatagagattatagtgaaataaagaatatattaagtaaggatgaaatattagctaag
tctgttgaatttggacatggaataaggcttttaaaacaagatccttttgaaataatagtg
tctttcataatttctgctaataatagaataccaatgattaaaaaagctataaaaaatata
agtgaaagatggggtgatcctatagagtataaaggtaacatatattatagctttcctaca
gtagaacaacttaaagatgcaacagaggatgaattaaaagcatgtagtgttggttttaga
gctaaatatataaaagatactgtaaataaaatataccaaaattctatagaagaatgtgag
caatatgagaaagagtatgatatgttatggataaagaatcaacaagatgatatatgtcat
aaagtgctacaaaattatagtggtataggtgctaaagttgcagattgtgttatgttattt
tctatggaaaagtattctgcatttccagtagatgtttgggttaagagggctatgcaatat
ttctatctagcccctgatgtatccctaaaaaaaataagagattttggaagggagaaattt
ggagaattatcaggatttgcccaacaatatttgttttattatgcaagagaaaacaaaatt
gacgttaatcaagaataa |