Clostridium botulinum BKT015925: CbC4_0061
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Entry
CbC4_0061 CDS
T01475
Name
(GenBank) DNA repair helicase, truncation, putative
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CbC4_0061
09124 Replication and repair
03420 Nucleotide excision repair
CbC4_0061
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbn03021
]
CbC4_0061
03036 Chromosome and associated proteins [BR:
cbn03036
]
CbC4_0061
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_0061
Enzymes [BR:
cbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
CbC4_0061
Transcription machinery [BR:
cbn03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CbC4_0061
Chromosome and associated proteins [BR:
cbn03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
CbC4_0061
DNA repair and recombination proteins [BR:
cbn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CbC4_0061
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
Helicase_C
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
AEB74744
LinkDB
All DBs
Position
55854..58205
Genome browser
AA seq
783 aa
AA seq
DB search
MKEKDTIKVSVRNLVEFILRFGDLVSTFTGTSRNVDAIKVHQKLQKSGGEGYTPEVPLTY
TVKKDDITLEIGGRADGIIKNDNNITIDEIKTTTRPLEFIDEDYNLIHWAQAKCYGFIYC
KNNNLHSIDIQLTYYEMDTKEIKRFKKKFNFIELEEFFFQVVNKYIYWAKNLKEFINIRD
RSIKKLSFPFKSYRKGQRKLAVSVYKTIVEGKKFFAEAPTGIGKTIATLFPSIKAMGEGY
TSKIFYLTAKTITRTAAEKAIENMRNQGLKIKSVTLTAKDKVCFSKDKGCDPESCEFAKG
HFDRINNAIYDIYKEDIFSREVIEKYSKKHKVCPFEFSLELCNVADCIICDYNYVFDPRV
YLKQFFSDGKSDFTLLIDEGHNLVDRAREMFSAEINKKEILNLKKDTNKSAKTVSKVLNK
INSFMIDLRKKCEVNSNILVSKDAHKEVIPHLREFSYVCEKWILENKNTNESFKEELLNF
YFKVLAFIRTYEYYDKKYITYAEKVKDDVRLKLFCLDPSHLIEESMKKGRATIVFSATLM
PMDYYIDILGGCQEDYRLKLQSPFNRENICLIMDNNISTKFKMREFTYDNIVSDIEGVIK
SKIGNYLVFFPSYKYMNEVYDRFIENNIEAKVIRQEIYMSEEDREKFLDNFCENPKETLV
SFAVMGGLFSEGIDLTHDRLIGTIIVSVGLPQVCLERNIISDYFKDKNGKGFEYAYMYPG
MNKVMQAAGRVIRTEKDKGIILLIDERFRFKNYFDLFPREWRDIAQISGFQEVKDKVIDF
WQK
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaaaagatactattaaagtctccgttagaaatttagtggaatttatactgaga
ttcggagatttagtttctacatttacaggaacttctagaaatgtagatgctataaaagta
catcaaaaattacaaaaatcaggtggagaaggatataccccagaagttcctcttacttat
acagtaaagaaggatgatattactctagaaatcggtggccgagctgatgggattattaaa
aatgataataatataactatagatgaaataaaaacaactacaagaccattggagtttata
gatgaggattataatttaatacattgggcacaagcaaagtgttatggatttatttattgt
aaaaataacaacttacatagtatagatattcagcttacttattacgaaatggatactaaa
gaaataaagagatttaagaagaagtttaattttatagaactagaagaattcttctttcag
gtagtaaataaatatatttattgggctaagaatctaaaggagtttataaatattagagat
agatctataaaaaaattatcgtttccatttaagtcgtatagaaaagggcagagaaaactt
gcagttagtgtgtataagactattgtagagggaaaaaagtttttcgcagaggcaccaact
ggcattggaaaaacaatagctacacttttcccaagtattaaggctatgggagaaggatat
acctcaaaaattttctatttaacggctaaaactattacaagaactgctgcggaaaaggca
atagaaaatatgagaaatcaaggtcttaagattaaaagtgttacacttacagctaaagat
aaggtttgtttttctaaggataagggatgtgatcctgagtcttgcgaatttgcaaaaggg
cattttgatagaataaataatgctatatatgatatttataaagaagatatattctcaaga
gaggttatagaaaagtattcaaaaaagcataaggtatgtccttttgaattttcactagaa
ctatgtaatgttgctgattgtataatatgtgattacaattatgtttttgatcctagagta
tatttgaaacaatttttttcagatggaaaaagtgattttacacttttaattgatgaagga
cataatcttgttgatagggcaagggagatgttctcagcagaaataaataaaaaagaaata
ttaaatttaaaaaaagatacaaataaatcggctaaaacagtatctaaagttttaaataag
ataaattcatttatgatagacctaagaaaaaaatgtgaggttaactcaaatatacttgta
agtaaggatgcacataaagaagtaattcctcatttaagagaattctcatatgtttgcgaa
aagtggatattagaaaataaaaacacaaatgaatcctttaaagaagagttattaaacttt
tattttaaagttttagcttttataagaacatatgaatactatgataagaagtatataacc
tatgctgaaaaagtaaaagatgatgtaaggcttaaacttttttgtttagatccttctcat
ttaatagaagagagtatgaaaaagggtagagctactatagtattttcagcaacattaatg
cctatggattattacatagatattttagggggatgccaggaggattatagattaaaacta
caatcacctttcaatagagagaatatttgtcttataatggacaataatatatccacgaag
tttaaaatgagagaatttacttatgataatatagtaagtgatatagaaggagttattaaa
agcaaaataggtaattatctagtgttttttccttcatacaaatatatgaatgaagtttat
gatagatttatagaaaataatatagaagccaaggttatacgtcaagaaatctatatgagt
gaagaggatagagaaaagtttttagataatttttgcgaaaatccaaaggagacattagtt
tcatttgctgttatgggaggacttttttcagaaggaattgacttaactcacgatagatta
attggaactataatagtaagtgttggattaccacaggtttgcttagaaagaaatataata
agtgattatttcaaagataagaatggtaaaggatttgaatatgcatacatgtatccagga
atgaacaaggttatgcaagctgctggaagagtaataagaacagaaaaggataaaggaata
atattattaattgatgagagatttagatttaaaaattactttgatttatttccaagggaa
tggagagatatagcacagataagtggatttcaggaagttaaagataaagtaatagacttt
tggcaaaaataa
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