Clostridium botulinum BKT015925: CbC4_0262
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Entry
CbC4_0262 CDS
T01475
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cbn
Clostridium botulinum BKT015925
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbn03016
]
CbC4_0262 (truA)
Enzymes [BR:
cbn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
CbC4_0262 (truA)
Transfer RNA biogenesis [BR:
cbn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CbC4_0262 (truA)
Prokaryotic type
CbC4_0262 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Acid_PPase
DUF2344
DUF919
DUF6795
Motif
Other DBs
NCBI-ProteinID:
AEB74942
LinkDB
All DBs
Position
258367..259107
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AA seq
246 aa
AA seq
DB search
MKKNVKLIIEYDGSNYSGWQKQKHSITVQQKIEEAISQITKTDTEIIGCSRTDAGVHARN
FVANFITNSSVPPSKFKYAINSKLPKDIVIKKSSEVSLDFHARFHSKGKKYVYTILNREE
PPTIDRNVMYHFNKDLNVDAMKEASKYFIGSHEFDSFYKKSGSSVKSTLRTIYYCDVTKC
EDVIKFTVIGEGFLYNMVRIMAGTLIEAGIGRIKPEEIKFIILAKDRERAGRSLPPQGLC
LQEVLY
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaatgtaaagcttattatagagtatgatggaagtaattattctggatggcaa
aaacaaaaacattcaataacagttcagcagaagatagaagaggctatttctcaaattaca
aagactgatacagagattatagggtgtagtagaactgatgctggagtgcatgcaagaaat
tttgtagccaattttattacgaatagtagtgtgccaccatcaaagtttaaatatgccatt
aacagtaagttacctaaagatattgtaataaaaaaatctagcgaagtttcattggatttt
catgctagatttcatagcaagggtaaaaaatatgtatatactatattaaatagagaagaa
ccaccaactattgatagaaacgttatgtatcactttaataaggatttaaatgtagatgct
atgaaagaggctagtaagtattttattggttcacatgaatttgattctttttataaaaaa
tcaggaagttcagttaaatctactcttagaactatatattattgtgacgttacaaaatgt
gaagatgtaattaaatttactgttataggtgagggattcttgtataatatggttagaata
atggctggtacattaatagaagctggtataggaagaataaaaccagaggaaattaaattt
attattttagcgaaggatagagaaagagcaggaagatcacttccacctcaaggactatgc
ttacaagaagtactatattaa
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