Clostridium botulinum BKT015925: CbC4_0425
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Entry
CbC4_0425 CDS
T01475
Symbol
uvrB
Name
(GenBank) exconuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CbC4_0425 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_0425 (uvrB)
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CbC4_0425 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CbC4_0425 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
DUF4391
AAA_5
DUF4288
DUF87
AAA_7
P-loop_SecA
Glyoxalase_2
TP_0700
Motif
Other DBs
NCBI-ProteinID:
AEB75105
LinkDB
All DBs
Position
442071..444062
Genome browser
AA seq
663 aa
AA seq
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MFLGDEKMDKFKIHSVYKPTGDQPKAIKSISKGILEGDKFQTLLGVTGSGKTFTMANIIE
KVQKPTLVLAHNKTLAAQLTSEFREFFPENCVEYFVSYYDYYQPEAYVPQTDTFIEKDAS
INDEIDKLRHSATSALLERKDVIVVASVSCIYGLGNPEEYKKLTVSLREGMEKDRDEIIR
QLVDIQYERNEINFVRGTFRARGDVLDIFPASSTNIGIRVEFFGDEIDKIREFDVLTGNI
LNTRKHASIFPASHFATSKEKLEIAIKKIEEELEERVKELIAQDKLLEVQRVKQRTNFDI
EMMREVGYCSGIENYSRVLDGRNPGTPPKTLMDYFPDDFLLFIDESHVTLPQIKAMYGGD
RSRKDNLVEYGFRLPCAYDNRPLKFQEFEGKLNQTVFVSATPSQYEFEHSTNIAEQIIRP
TGLLDPEIIVKPIKGQIDDLYSNINETINRGFRVLVTTLTKKMSEDLTDYLKEMGVKTEY
LHSSIDTIKRMEIIRDLRKGKFDVLVGINLLREGLDIPEVALVAILDADKEGFLRSETAL
IQTIGRAARNSESKVIMYADTITKAMDKAISETNRRREIQMQYNEEHGIVPTTVLKDIRD
VIQTKVSEDKEEYIVNNKNTMSKEEIEKLINKYEKEMKKVAKELQFEKAAEIRDEIQKLK
KQL
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgttcttaggagatgaaaagatggataagtttaaaatacattcagtatataaacctaca
ggagatcaacctaaagctattaaaagtatatctaaaggtatattagagggggataaattt
cagacactattaggtgtaacaggttcaggaaaaacatttactatggcaaatattatagag
aaagtccaaaaacctacattagtattagctcataataaaacattggcagctcaattgact
tcagaatttagagaatttttcccggaaaattgtgtagaatattttgtatcttactatgat
tattatcaaccagaagcatatgtaccacaaacggatacatttatagaaaaagatgcatcc
ataaatgatgaaattgataaacttagacattcagctacatctgctcttttagaaagaaaa
gatgttattgttgtagcttctgtttcttgtatatatggacttggtaatccagaagaatat
aagaagttaacagtttcattaagagaaggtatggaaaaagatagagatgagataattagg
cagttagtagatatacagtatgagagaaatgaaattaattttgttcgtggaacatttagg
gctagaggagatgttctggatatatttccagcatcgtcgactaacataggtattagagtt
gagttttttggtgatgaaatagataaaataagagagtttgatgttttgacaggaaacatt
ttaaatacaagaaagcatgcatcgatatttccagcatcgcactttgcaacttctaaagaa
aaattagaaattgctataaagaaaatagaagaagaattagaagaaagagttaaagagctt
atagcacaagataagttgttagaagttcaaagagtgaaacaaagaactaattttgatata
gagatgatgagagaagttgggtattgtagtggaatagaaaattactctagagttttggat
ggtaggaaccctggaacgccaccaaagacattaatggattattttccagatgattttctt
ttatttatagatgaaagtcatgttactcttccacaaattaaggctatgtatggtggagat
agatctagaaaagataacctagttgaatatggatttagacttccttgtgcatatgataat
agacctttaaaatttcaagaatttgaaggtaagttaaatcaaactgtttttgtaagtgct
acaccgtcgcaatatgaatttgaacattcaacaaatattgcagaacaaataataagacca
acaggacttttagatccagagattatagtaaaacctataaaaggtcaaattgacgatttg
tattcaaatataaatgaaactataaataggggatttagagttttagtaactacattaact
aaaaaaatgtcagaagatttaacagattacttaaaagaaatgggagtaaaaactgaatat
ttacattcaagcattgataccataaaaagaatggaaataataagagatttaagaaaagga
aaatttgatgttcttgttggaattaatcttctaagagaaggacttgatattcctgaggta
gcactagttgctatattagatgcagataaagaaggatttttaaggtcggaaacagcactt
atacaaactataggaagagctgctagaaattcagaaagtaaagttataatgtatgcagat
actataactaaagctatggataaagctattagtgagacaaatagaagaagagaaattcaa
atgcaatataatgaagaacatggaatagtgcctacaacggttttaaaggatataagagat
gttattcaaacaaaggtatcagaggataaagaagagtatattgttaataataaaaataca
atgagtaaagaagaaatagaaaaacttataaataaatatgaaaaggaaatgaaaaaggtg
gctaaagaacttcaatttgaaaaagcggctgaaataagagatgaaatacaaaaattgaag
aaacagctatag
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