Clostridium botulinum BKT015925: CbC4_0812
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Entry
CbC4_0812 CDS
T01475
Name
(GenBank) superfamily I DNA helicase (rep-like helicase)
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03420
Nucleotide excision repair
cbn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CbC4_0812
03430 Mismatch repair
CbC4_0812
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_0812
Enzymes [BR:
cbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CbC4_0812
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CbC4_0812
MMR (mismatch excision repair)
Other MMR factors
CbC4_0812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AEB75492
LinkDB
All DBs
Position
896350..898542
Genome browser
AA seq
730 aa
AA seq
DB search
MGAKMIEKSILKEFFYLRDKIIEYRYKELNEEQLRAVLSNNRNLAVIACPGAGKTTTLIR
KVDYLVTFGPIYKTKYYPESLNKEDIEILKEYIDYNKVNKRLNFLLRQKAINPNNIMIIT
FTRAAAKNMKKKYKALGNHKNSPFFGTFHGLFYKILSRVENRINIISTSIAYKLIKGVLS
TYLDEISDEKVKETLNSISYYKTINEDKDKFSPKIDKDIFLECYRTYEDYKLKNNLLDFD
DLQLRCKSLFMKNIKLLNGYRNFFKYILIDEFQDCDEIQIDILKLLNEDNSIFAVGDEDQ
CIYGFRGSKPECMVNFDTHFKEGKKIFLTTNYRCPKSVVNISDNLIKNNKMRNDKIFNAN
KEEMTKINVMNYIDERNQADSISINIMKLNSVSGYKYEDNAIIYRTNVESRSIIDSFIRK
KIPFKLLDKEYNFFEHFICKDIIAYLKLSIDCADKESFLRIINRPFRYISKVNLEKVKKN
NSGQDCFEILKDNENIPPFQLKKIDEIKKDIQYLNKISLAGAINSVLNNLEYYEYLKDYS
IKFKMDISELEEILEEFISASKDYNTIITFLAHINEVEYEIKNNKNDEQKSGVILSTIHG
VKGMEFKNVFILNCNEENIPHINSIETNIEEERRLFYVGVTRTIENLWLCICNDIRGKTK
KTSRFIEECDLSIIFNNLFKKDDMVIHKSFGNGKIISVNNNIIKILFENNIIRSFDSLVL
YNNGLIEKLV
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
gtgggtgcaaaaatgatagaaaagagtattttgaaagaatttttttatttaagagataaa
ataattgaatatagatataaagaattaaatgaagaacaactaagggcagttttaagcaat
aatagaaatttggctgtaatagcatgtccaggagcaggaaagacaactacacttattaga
aaagtagattatttagttacctttgggccaatatataaaactaaatattatccagagagt
ttgaataaagaagatatagaaattttaaaagaatatatagattataataaagttaataaa
agattaaattttttattaagacaaaaggctataaatcctaataatataatgattataact
tttacaagagctgcagctaaaaatatgaaaaaaaagtataaagctttaggaaatcataaa
aactcacctttctttgggacgtttcatggtcttttttataaaatattaagcagggtagaa
aatagaataaatataataagcacttcaatagcatataagcttataaaaggagtgttatct
acttatttggatgaaataagcgatgaaaaggttaaggaaactttaaattcaatatcatat
tataaaacaattaatgaagataaagataagttttctcctaagatagataaagatatattc
ttagaatgttatagaacatacgaagattataaacttaaaaataatttgttggattttgat
gatcttcaattaagatgtaagtctttatttatgaaaaatattaaattacttaatggatat
aggaatttttttaaatatatacttatagatgaatttcaagattgtgatgaaattcaaata
gatatattaaaattattaaatgaagataattctatttttgcagttggggatgaggatcaa
tgcatttatggatttaggggatcaaaaccagaatgcatggttaatttcgatacccatttt
aaagagggaaagaagatatttttaactactaactataggtgtcctaaaagcgtagttaat
atttcagataatcttataaaaaataataagatgagaaatgataaaatatttaatgcaaat
aaggaagaaatgactaaaataaatgtgatgaattacatagatgaaagaaatcaagcagat
agtatatcaataaatattatgaaattaaattctgttagtggatataaatatgaagataat
gcaattatttatagaaccaatgtagaaagcagaagcataatagattcatttattagaaag
aagataccttttaaattattagataaagagtacaatttttttgaacattttatatgcaaa
gatataattgcatacttaaaattaagtatagattgtgctgataaagaaagttttcttaga
ataataaatagaccatttagatatataagtaaagtaaatttagaaaaagttaaaaaaaat
aattcgggacaagattgttttgaaatcttaaaagataatgagaatatacctccatttcaa
ttaaaaaagatagatgagataaaaaaggatatacagtatttaaataagatatcgttggca
ggtgccattaattctgttttaaataatttagaatactatgagtatttaaaagattatagt
ataaaatttaaaatggatatatcagaattagaagaaattttagaggaatttatatcagct
tctaaagattataatactataataacttttttagctcatattaatgaagttgaatatgaa
ataaagaataataaaaatgatgaacaaaaaagtggtgttatattgagtacaattcatgga
gttaaaggaatggagtttaaaaatgtatttattttaaactgtaatgaagagaatatacca
catataaatagtatagaaacaaatatagaggaagagagaagacttttttatgtaggggta
actagaactatagaaaatctttggttatgtatatgtaatgatattaggggcaaaactaag
aagacatctagatttattgaagagtgtgatttatctataatatttaataatttatttaaa
aaagatgatatggtgattcataagagttttggaaatggaaaaataataagtgttaataac
aatattataaaaatattatttgaaaataatattataagaagttttgatagtttagtatta
tataataatggtttgatagaaaaattagtataa
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