Clostridium botulinum BKT015925: CbC4_1441
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Entry
CbC4_1441 CDS
T01475
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbn
Clostridium botulinum BKT015925
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbn03016
]
CbC4_1441 (truB)
Enzymes [BR:
cbn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CbC4_1441 (truB)
Transfer RNA biogenesis [BR:
cbn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CbC4_1441 (truB)
Prokaryotic type
CbC4_1441 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AEB76120
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Position
complement(1530335..1531204)
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AA seq
289 aa
AA seq
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MDGILNIYKPVGITSFDVVRQIKKITGIKKIGHTGTLDPLAKGVLPICIGKGTKIVDYLM
KDFKVYKAELKLGVITDTYDREGKELSVKDVNVSKEEIIDAINSFKGDILQVPPMYSALK
VNGKRLYELAREGKEIERAARPVTIYDIEILEISMPYVKFIVKCSKGTYIRSLCYDIGSK
LDCGGAMWDLERVQSGSFNKDNSIILENLTKDNVEDYIIPIDDALSQYDKAIVNAKAEKL
LVNGVRIADRRLLNTIELNKLYRIYNEDNKFLGLGLRNNQGLKIEKLLL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatattaaatatatataagcctgttggcataacatcatttgatgttgtacga
caaataaaaaaaataacaggtataaagaagataggacatacgggtacgttggatccttta
gctaaaggagtattacctatatgtattggaaaaggaacaaagatagtagattatttaatg
aaagattttaaagtatataaggctgaactaaaattgggggtaattaccgatacatatgac
agagaaggaaaagaactttctgttaaagatgttaatgtatcaaaggaagaaattatagat
gcaattaattcatttaaaggtgatattcttcaagttcctcctatgtattcagcattaaag
gtaaatgggaagagattgtatgaacttgctcgtgaaggaaaagaaatagaaagagcagca
agacctgtgactatatatgatattgagattttagaaataagtatgccgtatgtcaaattt
atagtaaaatgttctaaaggtacatatataagaagtttatgttatgacattggaagtaag
cttgactgcggaggtgctatgtgggatcttgaaagagtacaaagtggtagttttaataag
gataactctataatattagaaaatctaactaaagataatgtagaagattatattattcca
attgatgatgcattaagtcaatatgataaggctattgtaaatgcaaaagctgaaaaattg
ttagttaatggagttagaattgctgataggagacttttaaataccatagagctgaataaa
ctatatcgtatttataatgaagataataagttcttaggtcttggattaaggaataatcaa
ggattaaaaattgagaaactgttactttag
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