Clostridium botulinum BKT015925: CbC4_1503
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Entry
CbC4_1503 CDS
T01475
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CbC4_1503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_1503
Enzymes [BR:
cbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CbC4_1503
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CbC4_1503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
T2SSE
AAA_30
AAA_19
SLFN-g3_helicase
AAA_11
PIF1
Zn_ribbon_6
Microtub_bd
UvrD-helicase
AAA_7
NPHP3_N
PhoH
Flavi_DEAD
TrwB_AAD_bind
zf-CHY
Motif
Other DBs
NCBI-ProteinID:
AEB76182
LinkDB
All DBs
Position
complement(1594907..1597069)
Genome browser
AA seq
720 aa
AA seq
DB search
MQVDKIFTYKIPDNLINKLKIGHRVKVPFGKGNRNIDGFVIELYEEFHNKYKIKSIINIC
DNFTVLRKKDVDLIKKMRKKYLCTYLECIKVIIPTGIIKGVKNRIKEVIYIGNNLKEKFY
KEPYINIYEIVKAHNGLYTKTEISKKFNVSLSSINTMIKHGFLQKNETIVNRFNNRVYSN
YEEKNLNEEQQVVVDSILNSNKKIFLIHGITGSGKTEIYMNMVKHMINQNKESIMLVPEI
SLTPQMVERFKGRFGKDIAVFHSKLSDGERYDEWLRIKNKQVKVAIGARSAIFLPFDNLG
MIIIDEEHEGSYKSDSNPKYNAREIGELKCEIEDCKLVLGSATPAIDTYYRSMKDEIQLL
TLKNRADGAKLPDVFTVDMRDELKSGNKSIFSNLLYSGIEEALNNKEQIILFLNRRGFST
FVSCRECGYVFKCNHCDIALTYHSKGDYLSCHYCGEKYEVPHICTKCGSKYVKYFGVGTE
RIEKEVKKYFPSARTLRMDFDTTRKKDSYEYIYNTFKNGDADILIGTQMVTKGLDFKNVT
LVGVIAADISLNLPDFRSGEKTFQLITQVGGRAGRGEKKGKVIVQTYSPENYSIKYSSNN
DYDNFYKEEIEIRYDLNYPPFSKILAINISSKNENLLIKNIQKIGVVLKNNLEKNNKIDI
LGPCPCVISKVKEFYRWQILIKGQFDNELALNIKNFIYKNLQDVYNEFRISIDINPSTLL
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggttgacaaaattttcacctataagataccagacaatctaataaataaattaaaa
ataggtcatagagttaaagtaccttttggaaaaggtaatagaaatatagatggttttgtt
atagagttatatgaagagtttcataataagtataaaataaaatctattataaatatatgt
gataattttactgttcttaggaaaaaagatgttgaccttataaaaaaaatgagaaaaaaa
tatctttgtacatatttagaatgtataaaagtaataattccaacaggtataataaaggga
gttaaaaataggataaaagaagttatttatataggaaataatcttaaagaaaagttttat
aaggaaccttatataaatatatatgaaatagtaaaagcacataatggattgtatacaaag
acagaaataagtaaaaaatttaatgtctcgttgtcatctataaatactatgattaaacat
ggttttttgcagaagaatgaaaccattgtgaatagatttaataatagagtttattctaac
tatgaagaaaaaaatttaaatgaagaacaacaagttgtagtagactctatattaaattca
aacaaaaaaatatttttaattcatggtataactggtagtggaaaaactgagatttatatg
aatatggtaaaacatatgataaatcaaaataaagaaagtataatgttagttccagagata
tctttaacacctcaaatggtagaaagatttaagggcagatttggaaaagatattgctgtt
tttcatagtaaactttctgatggagaaagatatgatgaatggcttagaattaaaaataaa
caagttaaagttgctataggggctaggtctgcaatatttttaccatttgataatttgggt
atgataattatagatgaagaacatgaaggaagctataagtctgatagcaatcctaaatat
aatgcaagagaaattggagaacttaaatgtgaaattgaagactgtaaattagtgcttggt
tctgcaactccagctatagatacatattatcgaagcatgaaagatgaaatacaattattg
acgttgaagaatagagctgatggagcaaagttaccagatgtttttactgttgatatgaga
gatgaacttaaaagtgggaataaatctatttttagcaatttgctatattcgggtatagag
gaagctttaaacaataaagagcaaataatattatttttaaatagaagaggtttctcaaca
tttgtatcatgcagagaatgtggatatgtatttaagtgcaatcattgtgatatagctcta
acttatcatagtaaaggagattatttaagttgtcattattgtggtgaaaaatatgaagtg
ccacatatttgtactaaatgtggaagcaagtatgtaaagtactttggtgtaggtacagag
agaatagaaaaagaggttaaaaaatattttccaagtgcaagaacattgagaatggatttt
gatactactagaaaaaaggattcttatgagtatatatataatacttttaaaaatggtgat
gcagatatactaataggtactcaaatggtaactaaagggttagattttaaaaatgttact
ttggtaggagtaatcgcagcagatatatccttgaatttgcctgattttcgttcgggtgaa
aaaacatttcagctaataactcaagtaggtggaagagcagggagaggtgaaaaaaaagga
aaagttatagtgcaaacttatagtcctgaaaattatagtataaagtattcatctaataat
gattatgataatttttataaggaagaaatagaaataagatatgatcttaactatcctcct
ttttcgaaaatacttgctataaatattagtagcaagaatgaaaatctattaataaaaaac
atacaaaaaattggggttgtattaaaaaataatcttgaaaaaaataataaaatagatata
ttaggaccttgtccttgtgtaatatcaaaagttaaagaattttacagatggcaaatttta
ataaaaggacaatttgataatgaattggcattaaatataaaaaattttatttataaaaac
ttacaagatgtttataatgaatttaggattagtatagatattaatcctagcactttacta
taa
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