Clostridium botulinum BKT015925: CbC4_1575
Help
Entry
CbC4_1575 CDS
T01475
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CbC4_1575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbn03019
]
CbC4_1575
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_1575
Enzymes [BR:
cbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CbC4_1575
Messenger RNA biogenesis [BR:
cbn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CbC4_1575
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CbC4_1575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HTH_40
ResIII
MinE
SLIDE
Motif
Other DBs
NCBI-ProteinID:
AEB76254
LinkDB
All DBs
Position
complement(1672134..1674575)
Genome browser
AA seq
813 aa
AA seq
DB search
MNITSVDILEKYYGYKSFRKGQQVVIESILEGKDVLAIMPTGGGKSICYQIPALMMSGMT
IVISPLISLMKDQVDSIKTMGISCAYVNSTLNTYEFDEVINGIKNNKYKIIYIAPERLES
LEFYEAIKDIEVSQIAIDEAHCVSQWGHDFRVSYRNIPRFINKFINKPKITAFTATASEE
VREDIIKLLKLKDPKIFITGFDRENLNISIIKSGSKKEYLLNYIENNKEQSGIIYAATRK
EVDNIYEGLKNKGYSVGRYHAGLSDGERENNQEEFIHDRLDIMIATNAFGMGIDKPNIRY
VIHYSIPKSIEAYYQEIGRAGRDGEKSECILLFAPGDVHIQKYLIEVSIENSERKQKQYE
KLQEMIDLVYSNDCYRKYILNYFGEEFNQNCNNCSNCLNEGEIVDKTIDAQKVLSCIYKM
KRNFGITMVVDVLRGSKNKKVLNLGFNTLSTYGLMKAYSQDKLKNFINTLVSHGYIGLIG
GTYPVLNLNNRSVKVLKGEETVKFKVFEAKHKDTHINKLFNILKSLRYELASDEGVPPYV
IFGDGTLREMSLKYPINKEKMLQVSGIGEVKYEKYGEKFMGVISKYVKENNINVNNIYDI
QEQNDNKDVPLEVTTNEVLLEELLKIRNDFAVSENILPQMVLSKNTLKEISGRYPLNEEN
LKDISGIGPKKIEKYGKRILEVVNKYVNINSINVNWIDKKRRKVIIDGDERENNEIAMDM
LNEGRKLKDVSIELEVGVSTILGYITDYIKEGCKINFDLCLDELYTKEEEKHIVNICEKV
GYEKVSKIKKELSTEIKYETIRAVILKKYYLVF
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
ttgaatataacatcagtagatattttagaaaaatactatggatataaaagttttagaaaa
ggacaacaggtggttatagaaagtatcttagaagggaaagatgttctagccataatgcct
actggtggtggaaagtctatttgttatcaaatacctgcattaatgatgagtggtatgact
attgtaatttcacctttgatttcgcttatgaaggaccaggttgatagtataaaaacaatg
ggaataagttgtgcatacgtaaatagtacattaaatacatatgagtttgatgaagttata
aatggaataaagaataataaatataaaataatttatatagcacctgaaagacttgaatct
ttagagttttatgaagctataaaagatatagaagtgtcacaaatagcaattgatgaggca
cattgtgtttctcaatggggacatgattttagagtaagttatagaaatataccgagattt
ataaataaatttataaataaacctaagataactgcatttacagcaacagcttctgaagaa
gttagagaagatattataaagttacttaaattaaaagatccgaaaatatttataactgga
tttgatagagaaaatctgaatataagcataataaagtcaggaagtaaaaaagaatatctc
ttaaattatatagaaaataataaagaacaatcgggaataatttatgcagctactagaaaa
gaagtagataatatatatgaaggtttaaaaaataaggggtattctgttggaagatatcat
gcaggattatcagatggtgaaagagaaaataatcaagaagagtttatacatgatagatta
gatattatgattgcaactaatgcttttggaatgggaatagataagcctaatataagatat
gtaattcattacagcatacctaaaagtattgaggcttattatcaagaaataggtagagca
ggaagagatggagaaaagagtgaatgtatattattgtttgctccaggagatgttcatatt
caaaagtacttaatagaagtcagcatagaaaactcagaaagaaaacaaaaacaatatgaa
aaacttcaagaaatgatagatttagtttatagtaatgattgttatagaaagtatatatta
aattattttggagaagaatttaatcagaactgtaataattgcagtaattgtttaaatgaa
ggagaaatagttgataaaacaatagatgctcagaaagtattatcttgtatatataaaatg
aaaagaaattttggcataactatggttgtagatgtacttagaggttctaagaacaaaaaa
gttttaaatttaggttttaatactctatctacatatggattaatgaaggcatattctcaa
gataaattaaaaaattttattaatactttagtttcacatggttatataggattaattgga
ggtacatatccagttttaaatttaaataacaggtctgttaaagttttaaagggagaagaa
acagttaaatttaaagtatttgaagcaaaacataaggatactcatataaacaaattattt
aatatattaaaaagtttaagatatgaacttgcaagtgatgaaggggttccaccttatgta
atatttggagatggtactttaagagaaatgagtctaaagtatcctataaataaagaaaaa
atgttacaagtatccggtattggcgaagttaaatatgaaaaatatggtgagaaatttatg
ggggttatctcaaaatatgttaaagaaaataatataaatgtaaataatatatatgatatt
caggaacaaaatgataataaagatgttcctttagaagtaactactaatgaggttttatta
gaagagttattaaaaataagaaatgatttcgcggtaagtgaaaatatacttcctcaaatg
gtattatctaaaaatacattaaaggaaataagtggaagatatcctttaaatgaagaaaat
ttaaaagatatttcaggtataggacctaagaaaattgagaaatatggtaagagaatatta
gaagtagtaaataaatatgtaaatattaatagtattaatgtaaattggatagataaaaaa
agaagaaaagttataatagatggtgatgaaagagaaaataatgagatagcaatggatatg
ttaaacgaaggtagaaaattaaaagacgtttcaatagaacttgaagttggagtgtccact
atattaggatatattactgattatataaaagaaggttgcaagattaatttcgatttatgc
ttagatgagttatatacaaaagaagaggaaaaacatattgttaatatatgtgaaaaagta
ggatatgaaaaggttagtaaaataaaaaaggaactttcaacagaaattaaatatgaaact
ataagagcagttatattaaaaaagtattatttagtattttga
DBGET
integrated database retrieval system
