Clostridium botulinum BKT015925: CbC4_1813
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Entry
CbC4_1813 CDS
T01475
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CbC4_1813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbn03021
]
CbC4_1813
Transcription machinery [BR:
cbn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CbC4_1813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AEB76487
LinkDB
All DBs
Position
complement(1936919..1938025)
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AA seq
368 aa
AA seq
DB search
MADNKKKDTTNKNDVKDNKDRMKIIKNLIDKGKKKGNLTYKEIMDELDNVELTPEQIEKV
YGVLESMDIEVVGDIKEIETEEEEIDLSVPEGISIDDPVRMYLKEIGKVPLLSPDEEINL
AQRIEDGDMYAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKG
YKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPQPEEIA
KIMEMPVDKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQL
INVLDTLTPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRS
KKLKDYLD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcagataataaaaagaaagacactacaaacaaaaatgacgtaaaagataataaggac
agaatgaaaataataaaaaaccttatcgataaaggaaagaaaaaaggtaatttaacatat
aaagagataatggatgaattggataatgttgaattaactccagaacaaatagaaaaagtt
tatggtgttcttgaatcaatggatatagaagttgttggtgatataaaagagatagagaca
gaagaagaagaaatagatctttcagtaccagaaggtatatctatagatgatcctgttaga
atgtatttaaaagaaataggaaaagtacctcttttatctccagatgaagagataaatctt
gctcaaagaatagaagatggagatatgtatgctaaaaagaaattagcagaagctaactta
agacttgttgtaagtatagctaaaagatatgtaggacgtggaatgctatttcttgacctt
atccaagaaggaaatttaggacttataaaagcagtagaaaagtttgattatagaaaagga
tataaatttagtacttatgctacatggtggattagacaggcaataacaagagctattgca
gaccaagcaagaactataagaattccggttcatatggtggaaacaataaataaacttata
agagtatcaagacaattattgcaagaattaggtcgtgaaccacaaccggaagaaatagca
aaaataatggaaatgccagttgataaggtaagagaaatcatgaagatagctcaagagcca
gtgtcacttgaaactccaattggagaagaagaagatagtcatctaggagattttatacct
gatgatgaagcaccagcaccagcagaagcagcggcatttactatgttaaaagaacaactt
ataaatgtgctagatacacttactccaagagaagaaaaagtattaagattaagattcggg
cttgatgatggaagagcaagaactttagaggaagttggaaaagaatttaatgtaacaaga
gaaagaataagacaaatagaagcaaaagctttaagaaaactaagacatccaagtagaagt
aaaaaattaaaagattatttagactaa
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