Clostridium botulinum BKT015925: CbC4_2216
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Entry
CbC4_2216 CDS
T01475
Name
(GenBank) sensory box sigma-54 dependent transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
cbn
Clostridium botulinum BKT015925
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbn03000
]
CbC4_2216
Transcription factors [BR:
cbn03000
]
Prokaryotic type
Helix-turn-helix
Other families
CbC4_2216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_2
GAF
AAA_5
PAS
PAS_9
Mg_chelatase
HTH_30
HTH_50
PAS_8
AAA_16
AAA
PAS_4
RtcB
AAA_3
HTH_7
AAA_7
Bac_DnaA
IclR
HTH_17
DUF2089
HTH_28
HTH_29
NACHT
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AEB76881
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Position
complement(2409757..2411652)
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AA seq
631 aa
AA seq
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MEYNKKLHEEIIKKSHIRSMKYGVERERVISKKILSGKDCVVNIRKNQSLIKAAVPMMNT
LQEILQGSGFIIVLTDENGCILNTIGDEDIMIVARSMNMITGAYMDEKSIGTNAMGVTIK
EDIPIQISAKEHFVNAYHKWTCSAAPIHDIRGNIIGSINLTGAENKVHPHTLGLAVAAVR
SIENQLKADEINKKLEEAYQYMNTIIDSIPSGIYTINSEGVVKSINKYACKVLGIKEENI
INNSVENILPKWESILNKLKIGKTIRDKETIVNGCVNGRYNISAIPIRMIDEVVGMVVVF
KEIQNVYKLINKYGGMSAKYTFDDIIGKSDEIKRVLEFSKDIASSPSTILIQGESGTGKE
LLAQSIHNYSNRSKQSFIAINCGAIPKSLIESELFGYEEGAFTGSKNGGHSGKFELANGG
TLFLDEIGEMPLDMQVKLLRVLQEGYVTRVGGNKIIPVDVRIIAATNKNLEDEVKKGTFR
EDLYYRLKVIPIKLPSLRERNGDLKILIEHYLKLKAAKLKKDIPNIDEKILREMMLYHWP
GNIRELENYIENLVNLNGRTTFKLNVHKENEKIMLNNEEKNDEVCSIEKMEIKLIKKCLK
KHSGNISKTAKILGVSRNTLYLKMKKYEILI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaatataacaaaaaattacatgaagagataataaaaaagtcgcatataagatctatg
aagtatggggtagaaagagagagggttatttctaaaaaaatactaagtggaaaagattgc
gtagttaatataagaaaaaaccaaagtcttattaaggcagctgtacctatgatgaacact
ttgcaagaaatattacaaggttcaggatttataatagtacttacagatgaaaatggatgt
atattaaatacaataggtgatgaagacattatgattgtagcgagaagtatgaatatgata
acgggtgcatatatggatgaaaaaagtataggaactaatgctatgggagttacaataaaa
gaagatataccaatacaaatttccgctaaggaacattttgtaaatgcatatcataagtgg
acctgctctgctgctccaattcatgatataagaggaaatataatagggagcataaattta
acgggggcagagaataaagttcaccctcatacacttggattagctgtggctgcagttcgt
tcaatcgaaaatcaattaaaagctgatgaaattaataaaaaattagaagaagcttatcaa
tacatgaatacaataatagattctataccttcaggaatatatacaattaactctgagggg
gtagttaaaagtataaataaatatgcttgcaaagttttaggaattaaagaagaaaatata
ataaataatagtgtggaaaatatattacctaagtgggagagtatattaaacaaattaaag
attggtaaaactattagggataaggagactatagttaatggatgtgtaaatggaagatac
aatataagtgctatacctataaggatgattgatgaagtagtggggatggtggtagttttt
aaggaaatacaaaatgtatataaacttataaataaatatggtgggatgagtgctaaatat
acttttgacgatataattggaaaaagtgatgagataaaaagggtattagaattttcaaaa
gatatagcatctagtccatcaactatactcattcaaggtgaaagtggcacgggtaaggag
ttgttagctcaatcaattcataattatagtaatagatcaaaacaaagttttatagctata
aattgtggtgctatacctaaaagtttaattgaaagtgaactatttggatatgaggaaggt
gcatttacaggatctaaaaatggggggcattcaggaaaatttgagttagcaaatggcgga
actttatttttagacgagataggagaaatgccattagatatgcaagtgaagctattaaga
gttttacaggaggggtatgttacacgtgttggaggcaataaaataattccagtagatgta
agaataatagctgctacaaataagaatttagaagatgaagttaaaaaaggtacctttaga
gaagatttatattatagattaaaagtaatacctataaagttaccttcattaagagaaaga
aatggagatcttaaaatacttatagaacattacttaaaattaaaagcagctaaattaaaa
aaagatatacctaatattgatgaaaaaattcttagagaaatgatgttatatcattggccg
ggaaatataagagaattagaaaattatatagaaaatttagtgaatttaaatggaagaaca
acttttaaacttaatgttcataaggaaaatgaaaaaataatgcttaataatgaagaaaaa
aatgatgaagtatgttctattgaaaaaatggaaataaagcttataaaaaaatgtctaaag
aaacacagtggaaatatatcgaaaactgccaaaatattaggtgtatcaaggaatacctta
tatttaaaaatgaagaaatatgagatattgatataa
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