Clostridium botulinum BKT015925: CbC4_4075
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Entry
CbC4_4075 CDS
T01475
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbn
Clostridium botulinum BKT015925
Pathway
cbn03030
DNA replication
cbn03430
Mismatch repair
cbn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CbC4_4075
03430 Mismatch repair
CbC4_4075
03440 Homologous recombination
CbC4_4075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbn03032
]
CbC4_4075
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_4075
Enzymes [BR:
cbn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CbC4_4075
DNA replication proteins [BR:
cbn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CbC4_4075
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CbC4_4075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Peptidase_C71
Motif
Other DBs
NCBI-ProteinID:
AEB77275
LinkDB
All DBs
Position
p1BKT015925:67349..70864
Genome browser
AA seq
1171 aa
AA seq
DB search
MDGMGTPKEILDRCDELNIKSYAITDHGTEYALYYFAELQEKYKTKILYGIELYEAYDHT
VQDPNNKYFHLLTIAKNQSGIQALHRLTTMGEFEGKYFKPRIDLNQLKEFKDDLIIGSAC
LAGKINKATTYEQAKQYALEYKEIFSDNFYLELQAHTSEDQIKANKRLMKLHYDTNIPYI
ITSDSHYVKKEDKENHANFVNVNRKNADVTTTGEIYDDCYIHSTDEMYEIMFKSELTEDE
ITIGLQNTNKIADICNGTIQFHEPVLPEVKIPNEYKSEEEYFMALITKGWKDRNMDEQIK
NDLLHTEQDYKQRVLHEYNVIKQMEYISYHLIVADYMQWAVNQRIPTAPARGSAGGSLIA
YLLKITNINPLKYDLLFERYLNPERVSLPDIDSDFSSGRREEVFKYLQQTYGEEYVAQII
NFSKYTPKVAIQDAGKMIKVPIKDVNVIKEFMQDDTIDDSIQNAKNNKKLIDLLNSYPEM
LSLAKSFEGRVKTTSTNACGTVISSKPIYQYCGMKKGDNDEQLLQVDKVITEKLGMVKCD
ILGTTVLQIIDEVMKMADMDFYDLYTKIPLDDKETYEFFKKGLYYGVFQLGSYNMTKFFM
KLQPKSIEDICLGISAYRPGSMKYIDDIINRKEGKEPIVYDHEVLEPILKPTYGICVYQE
QVMQVLQAMGGFSFAQADLVRRGMAKKKAQYVLGQRNNFIYGLVEFTIDGTRCTTTYELA
KEYLNDIEYTVVIEGAIHKGIEIKIAKKVFDDLEDFALYGFNKSHGLAYALLAYYTAYLK
CHYPTYFMKTILSHAKDGMEIAQYLTQCKDLCVKVVHPNINESNLGFSVYNGSILYGIGS
LYNVGEPTTRQIMNKRPYTSFEDFINKNVNNIAEDEIKIDKSALISLINSGCFDGLPIEE
NSTTLCDRQFLLMKVFYNVTSLIQKVSTTQIPELFDNPDIDTKEFYKEKQLYDLHKKILS
KKNKLNLYKDDEIITTFKNNYSNDTFEIENDELNIIKNKYTSEYNKHLKHLKQILKENSD
QYTLLINKSRVVNAYLDYVKNNNEADLEFESTSFYFSKSWLEDSAEKYHVDEFKDIPNLN
MDEVGYYKKKDLYTIVGVLTGKIKKHSEIVLLTNSGIVIAKLGDILYNSVASDLKRGDKI
ALSGYVGNGFFRAEFYQNNKSNKLLALKVLN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggatggaatgggaacaccaaaagaaatactagatagatgtgatgagctaaatataaaa
tcatatgcaattacagatcatggaactgaatatgcattatattattttgctgaattgcaa
gaaaaatataaaactaaaatattatatggaatagaattatatgaagcatatgaccataca
gtacaagatcctaataataaatactttcatttactcactatagctaaaaatcaaagtggt
atccaagctttgcataggttaactaccatgggggaatttgaaggtaaatattttaaacct
agaatagacttaaatcaattaaaagagtttaaagatgatttaattattggtagtgcctgt
ttggcaggtaaaattaacaaggcaacaacatatgaacaggctaaacaatatgcattagag
tacaaagaaatatttagtgataatttttatttagaattacaagcacatacttctgaagat
caaataaaagctaataaaagattaatgaaattacattatgatactaatataccatatata
attacaagtgatagccattatgttaaaaaggaggacaaagaaaaccatgctaactttgta
aatgtaaatagaaagaatgcagatgtaacaactacaggtgaaatttatgatgattgttat
atccattctactgatgaaatgtatgaaattatgtttaaatcagaattaacagaagatgaa
attactattggcttacaaaatacaaataaaattgctgatatatgtaatggaactattcaa
tttcacgaaccagtattacctgaagttaaaatacctaacgaatataagtcagaagaagag
tattttatggctttaataactaagggttggaaagacagaaacatggatgaacaaattaaa
aatgacctattacatacagaacaagattataaacaaagagttttgcatgaatataatgta
atcaaacaaatggaatacatatcatatcatttaatagttgctgattatatgcaatgggca
gtcaatcaaaggattcctactgctcccgcaagaggatcagcaggaggttcattaatcgca
tatttattaaaaataactaatataaatccattgaaatatgacttgctttttgaaagatat
ttaaatcctgaaagagttagtttacctgacatagatagtgattttagttcaggcagacgt
gaagaagtttttaaatatctacaacaaacatatggagaagaatatgtagcacaaattatt
aacttctctaaatatactccaaaggtcgcaatacaagatgcaggtaaaatgatcaaagtt
ccaatcaaagatgtaaatgtaattaaagagtttatgcaagatgacactattgacgattct
attcaaaatgctaaaaataataaaaaattaatagatttattaaacagctatccagaaatg
ttatctttagctaaatcatttgaaggtagagtgaaaacaacatctactaacgcttgtggg
acagttatatcttcaaaacctatatatcaatattgtggtatgaaaaaaggagataatgat
gaacaactattacaagttgataaagttattacagaaaagttagggatggttaaatgtgat
atattaggtacaactgttttgcaaatcatagatgaagtaatgaaaatggcagatatggat
ttttatgatctatatacaaaaataccattagatgacaaagaaacatatgagttttttaaa
aagggtttgtactatggtgtatttcaattaggtagttacaatatgactaaattctttatg
aagttacagcccaaatctatagaagatatctgtttaggtatatcagcatacagaccaggt
agtatgaagtatatagatgatattattaatagaaaagaaggaaaagaaccaatagtatac
gatcatgaagttttagaacctatattgaaacctacatatggaatttgtgtgtatcaagaa
caagttatgcaagtgttacaggctatgggtggattttcatttgcacaagccgaccttgta
agaagaggaatggcaaagaagaaagcacaatatgtattaggacaaagaaataactttata
tatggtcttgtagaatttactattgatggtacaagatgtactactacatatgaattagct
aaagagtatttaaatgatattgaatatactgtagttattgaaggggcaatacataaaggg
atagaaattaaaatagctaaaaaagtgtttgatgatttggaggattttgcattatatgga
ttcaataaatcacatggattagcgtacgcattgttagcttattataccgcatatttaaaa
tgtcattatcctacatactttatgaaaacaatattaagtcatgctaaagatggaatggaa
atagcacaatatctaacccaatgcaaagacttgtgtgttaaagtagtacatcctaatatt
aatgaatcgaatttaggatttagtgtatataatggttcaatactttatggtatcgggtca
ttatacaatgtaggagaaccaacaactaggcaaattatgaataaaagaccatatacatca
tttgaagacttcataaacaaaaatgttaacaacatagctgaagatgaaataaaaatagat
aagtcagctttaattagtttgataaatagcggatgttttgatgggttgccaattgaagaa
aatagtacaacgttatgtgatagacaatttttattaatgaaagttttttacaatgttaca
tcactaattcaaaaggtatcaactactcaaattccagagttatttgataatccagatata
gatacgaaagaattttacaaagaaaaacaattatatgatttgcataaaaaaatattaagc
aagaaaaacaaattaaatttatataaagatgatgaaattataacgacttttaaaaataat
tatagcaatgatacttttgaaatagaaaatgatgagttgaatattatcaaaaataaatat
acatctgaatataataaacatttaaaacatttgaaacaaattttaaaagaaaatagcgat
caatataccttactaataaataaaagtagagtagtcaatgcatatttagattatgtaaag
aacaataatgaggctgatttggaatttgaaagtacaagtttttatttttctaagtcatgg
ctagaagattcagcagaaaaatatcatgtagatgaatttaaagacatacctaatttaaac
atggatgaagtgggttattataagaaaaaagatttatacactattgttggagtattgaca
ggtaaaattaaaaaacatagtgaaatagtattattaactaatagtgggattgtaatagct
aagttaggtgatattttatataatagtgtcgcttctgatttaaaaagaggtgataagata
gcattaagtggttatgttggtaatggattttttagagctgaattttatcaaaataataaa
tcaaataaattattggcactaaaagtattgaactag
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