Clostridium botulinum BKT015925: CbC4_4107
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Entry
CbC4_4107 CDS
T01475
Name
(GenBank) putative DNA gyrase B subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cbn
Clostridium botulinum BKT015925
Brite
KEGG Orthology (KO) [BR:
cbn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbn03032
]
CbC4_4107
03400 DNA repair and recombination proteins [BR:
cbn03400
]
CbC4_4107
Enzymes [BR:
cbn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CbC4_4107
DNA replication proteins [BR:
cbn03032
]
Prokaryotic type
DNA Topoisomerases
CbC4_4107
DNA repair and recombination proteins [BR:
cbn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CbC4_4107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseB
DNA_gyraseB_C
DNA_gyraseA_C
Toprim
UspB
Motif
Other DBs
NCBI-ProteinID:
AEB77307
LinkDB
All DBs
Position
p1BKT015925:103709..107962
Genome browser
AA seq
1417 aa
AA seq
DB search
MADLKRLKGSERVRKRVSVMMGSDDIRGCQHTLFEIVSNSIDRHRKGFGNYIKVIKYEDL
SYTIIDHADGLPMDWNDKENAYNWDLALKVLYAGDNYDANSTALGINGLGLCSSQYASEY
MKVISYKDGKKYTVKCKKGRPIDKETEEFICGDDDNLFTKEQGERVLLVESNTESKTGTY
IHYKPDLEVFTNIDISIDWINDKLDKQSMVNKGLKIEVYDEKEDKLYTHYYESGIKDYIK
TISDDNNFSDVIYFTDKGKGRDKVDKPEYDYNYEIALVFNNEINKLEYYHNSSELLQGGS
TADAINLAFTYAINEYAKDNNLFNKNESKIKFTDIQDSLICVISSFSTMTSYANQTKLSI
DNKFIKDFTNQSLKEKLKLYFIENKLEADRVVNQILINKRANDKAEKTKLNIKKTLQTKS
NFDDTDNFYACTSNDKSITELYLAEGSSAQGSIVMGRNSKFQACYHVGGKMLSLLKADFE
KIFKNKVVRELFQYLGCGIEIKSKHNKDLNTFDENNLNYSKIILATDQDTDAFQIRCLML
TAIHRLAPTLIKHGYVYIAESPLYEITTADKVYHAYTEEEKITILEKLSKKGIKYDKPER
NKGLGEVDSDIIAETMMNPKTRKITRVTVQDVEKMANTFELWLGDEVKPRKEVITSNFDY
IEHFDNEQEKDIVKVLNENYLPYAIEVIKERAIISIDGFKPAHRKLLWTLHESNLYNKRT
KSAHIVGSNMSLNVHGDGSIYETLVRMAQKDTLLYPYVNGKGNFGQHTSKSLQNAHMRYT
EAGASNINKEFFHGINKNAVDFVPNFDGEKEEPILLPTTFPNVLVNANKGIAVGMASATP
SFNLKEVCDLTIAYIKDTNIVVSDYLLCPDFATGGFIVRDVDKLNQIYETGQGSVTLRAK
YGVKDNEIIVTEIPYTTNRESIVKDIKTLCRESKDNIIRNITNVIDSTDRKGMSITIKIK
KNTNIELLMEKLYANTKLQDSYSLNMNIVCLDKIPRVLSIKRILDEWLKFRRMCISRVSN
YDKKDKEHKLHLLNAFKIILTDIDALVHITRNAIDDDDMIKQLQLYFKIDQEQAEYVSNI
KLKKLNKNNIIEITEQQITALQQEISDLKNIQNDETRINNIIIQQLQNIRDKYKIPRKTE
IINVEDIPSVTLEDIKIEDFNPTLVLTEQQYIKKNRVFSQSQKLKDDDKILQFHQCNNKD
DLLLFTNKGNVLIRKVYELDEHKPSTYGDFLPNLLGEHLENDEEVIYISTTKDYKGSVVS
VFENGYIARTDLQTYKPKQNRQIPMSAYNTDSKIVSIQLITNDTDILLVSQEGKSLIINT
SQIRPTKSRNTQGVSGMKIDIETNKIIASIIGVTVDDNFNIETEKGKSKFIMLNDVAPNG
KESMTEYLKGNRNTQGNFIYNTRQKNDKVIKLTKQEN
NT seq
4254 nt
NT seq
+upstream
nt +downstream
nt
atggcagatttaaaaagactaaaaggttcagaaagagtaagaaaaagagtatctgttatg
atgggatcagatgatataagaggttgtcaacatacattatttgaaatagtgagcaatagt
atagataggcaccgtaaaggatttggaaattacataaaggttataaaatatgaagattta
agttatacaataattgaccatgcagatgggttacctatggattggaacgataaagaaaat
gcttataactgggacttagctttaaaagttctatatgcgggagataactatgatgcaaat
tctactgcattaggaataaacggtttaggtttatgtagttctcaatatgcttctgaatat
atgaaagtaatatcttataaagatggtaaaaagtatactgttaaatgtaaaaaaggcaga
cctattgataaggaaacagaagaatttatatgtggagatgatgataacttatttaccaaa
gaacaaggggaaagagttttattagtagaatctaatacagaaagtaaaacaggtacatat
atacattacaagcctgacttagaagtattcacaaatatagatatatcaatagattggata
aatgataaactagataaacaatctatggttaacaaaggattaaaaatagaagtttatgat
gaaaaggaagataagttatatactcattattacgaaagtgggatcaaggattatattaag
actatttcagatgataataactttagtgatgttatttattttactgataaaggaaaagga
agagataaggtagataaacctgaatatgattataattatgaaattgctttagtatttaat
aatgaaatcaataaattagaatattatcataacagttcagaactattacagggtggttca
actgctgacgctattaatttagcttttacatatgcaataaatgaatatgctaaagataat
aatttatttaataagaatgaaagcaaaataaaatttactgatatacaagatagtttaata
tgtgtaatttctagtttttcaactatgacaagttatgcaaatcaaacaaaattaagtata
gataataaatttattaaagattttactaatcaatcattaaaagaaaagctaaaattatat
ttcatagaaaacaaacttgaagctgatagagttgttaatcaaatattaattaataaacgt
gctaacgataaagctgagaaaacaaaattgaatataaaaaagacattacaaacaaaatca
aattttgatgatacggataatttttatgcttgcacttcaaatgataagagtatcacagaa
ttatacttagcagagggatcgtcagctcaaggtagtatagtcatggggagaaattccaag
tttcaggcgtgttatcatgtaggtggtaaaatgctatcgttgttaaaagccgattttgaa
aaaatatttaaaaataaagtagttagagaattatttcaatacttgggctgtggtatagaa
ataaaatccaaacataataaggatttaaacacctttgatgaaaacaatttaaattatagt
aaaattatattagctacagaccaagatacagatgcttttcaaattcgttgtttaatgtta
acagccatacatagattagcaccaacattaattaaacatggatatgtttatattgcagaa
tcgccattgtatgaaattactactgctgataaagtatatcatgcatacactgaagaagaa
aaaattaccatattggaaaaattgagtaaaaagggtattaaatatgataaaccggaaaga
aacaagggattaggtgaagttgacagtgatattattgctgaaacaatgatgaaccctaag
actagaaaaattacaagggtgacagtacaagatgttgaaaaaatggctaatacatttgaa
ctatggttaggtgatgaagtaaaacctaggaaagaagtaattacatctaatttcgattac
atagaacactttgataatgaacaagaaaaagacatagtaaaagtattaaatgaaaattat
ttaccttatgctattgaagttattaaagaaagagctattatttcaatagatggttttaaa
cctgcacatagaaaactgttgtggacattacatgaaagtaatttatacaataaaagaact
aaatcagctcatatagtgggttcaaatatgtctttaaatgtacatggagatggtagtatt
tatgaaaccttagttagaatggcgcagaaggatactttattatatccgtatgttaatggt
aagggaaactttggtcaacatacttctaagtcgttacaaaatgcacatatgagatataca
gaagcaggagcgagtaatattaacaaagagttttttcatggtattaataaaaatgctgtg
gattttgtacctaattttgacggagagaaagaagaacctattcttttaccaacaacattc
cctaacgtgttagttaatgcaaataaaggcattgcagttggtatggcttcagctactcct
agttttaatcttaaagaagtttgtgatttaactattgcatatattaaagatacaaatatt
gtcgtatctgattatttattatgtcctgattttgccactggaggatttattgttagagat
gttgataaattaaatcaaatatacgaaacgggacaaggtagcgttactttacgtgcaaaa
tatggagtgaaagataatgagattattgtaacagaaataccatatacaaccaatagagaa
tcaatagttaaagatataaagactctatgcagagaaagtaaagataatattattagaaat
attactaatgttattgatagtacggatagaaaagggatgtctattacaattaaaattaag
aaaaacacaaatatagaattattaatggaaaaattatatgcaaataccaaattacaagat
tcatactcgttaaatatgaatatagtatgcttagacaagatacctagggtattaagtatc
aagagaattttagatgaatggttaaaattcagaagaatgtgtatatcaagagtttctaat
tatgataagaaagataaagaacataaattacatttattaaacgcatttaaaattattcta
actgatatagatgctttggttcacattacacgaaatgctatagatgatgatgacatgata
aaacaattacaattatattttaagatagatcaagagcaagccgaatatgtgtcaaatatc
aaattaaaaaaattaaacaaaaacaatataattgaaattacagagcaacaaattacagca
ttacaacaggaaatatctgacttgaaaaatattcaaaatgatgaaactcgtataaacaat
attataattcaacaattacaaaatataagagacaaatataaaatacctagaaaaacagaa
attattaatgttgaagatatacctagtgtaacacttgaagatataaagatagaagatttt
aatcctactctagtccttacagaacaacaatacataaagaaaaatagagtattttcacaa
tctcaaaagttaaaagatgatgataaaatactacaatttcatcaatgcaacaacaaagat
gacttattgttattcactaataaaggtaatgtattaattcgtaaagtatatgagttagat
gaacacaaaccttcaacatatggtgacttcttacctaatctattaggtgaacatcttgaa
aatgatgaagaagtaatttacatatcaactactaaagattataaggggtcagttgtatca
gtatttgaaaatggatatattgctagaacagatttacagacatataagcctaaacaaaat
aggcaaatcccaatgagtgcatacaatactgatagtaaaatagtatctatccaactaata
accaatgatacagatattctattagtatcacaagagggtaaatcattaattatcaataca
tctcaaattagacctaccaaatcaagaaatactcagggtgtatccggaatgaaaattgat
attgaaactaataaaataatagcttcaattataggtgtaacagtagacgataactttaat
attgaaactgaaaaaggtaaatctaagtttattatgcttaatgatgtggctccaaatggt
aaagaatctatgactgaatatttaaagggtaatagaaatactcaaggtaatttcatatat
aatacaaggcaaaagaatgacaaagtaatcaaattaacaaaacaagagaattaa
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