Clostridium botulinum A ATCC 3502: CBO0006
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Entry
CBO0006 CDS
T00533
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbo03032
]
CBO0006 (gyrB)
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO0006 (gyrB)
Enzymes [BR:
cbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CBO0006 (gyrB)
DNA replication proteins [BR:
cbo03032
]
Prokaryotic type
DNA Topoisomerases
CBO0006 (gyrB)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CBO0006 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
CAL81560
UniProt:
A5HXQ2
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All DBs
Position
4403..6316
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AA seq
637 aa
AA seq
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MSQENKQVYDESQIQVLEGLEAVRKRPGMYIGSTSLRGLHHLVYEIVDNSIDEALAGFCT
HIEVFIHKDNSITVVDDGRGMPVGMHSKVKKPAVEVIMTILHAGGKFGGGGYKVSGGLHG
VGASVVNALSEQCEVEVRREGHIWKQKFERGITKTGLDIVGDTEDHGTKIYFKPDIEIFD
ELEFEYDTLAHRLRELAFLNKGIKISLTDERYDKKEMFHYEGGLRSFVLYLNRNKEKLHQ
QPIYVDENKDGCIVEIAMQYNDGYAENIFSFANNIDTIEGGTHLAGFKSALTRVINDYAR
KFNYLKDTDKNLSGDDVREGLTAVISVKLTDPQFEGQTKTKLGNGEVRGIVDTIVGQSIG
SFLEENPNVGKIIIEKGLSASRAREAAKRARELTRRKSILESTSLPGKLSDCSSKDPSLC
EIYLVEGDSAGGSAKQGRNREFQAILPLKGKIMNVEKQRLDKILASDEIRAMITAFGAGI
GKEFDIDKIRYNRIIIMTDADVDGAHIRTLLLTFFYRYMKELIEEGHVYIAQPPLYRIYK
AKKEIYVYSDPELDAALLELGGKDTNTNIQRYKGLGEMNPEQLWETTMDPEHRTLLQVTV
EDAMEADEIFTILMGTKVEPRRDFIESNADKVVNLDI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaagaaaataaacaagtttatgatgaaagtcaaattcaagtgttggaaggttta
gaagctgttagaaaaagaccaggaatgtatattggaagcactagtttaaggggacttcat
catttggtttatgaaatagttgataatagtatagatgaagcgctagctggtttttgtaca
catatagaagtttttatacacaaagataattctataactgtggtagacgatggacgtgga
atgccagttggcatgcattcaaaggtaaaaaaacctgctgttgaagtaataatgactata
ttacatgcaggtggaaaatttggtggtggaggctacaaggtttctggtggacttcatggt
gttggagcttctgttgttaatgccttatcagaacaatgtgaagtagaagtaagaagagaa
ggccatatttggaaacaaaaattcgaaagaggtataacaaaaactggattagatatagtt
ggagatacggaagatcatggtacaaaaatatattttaagccagatattgaaatatttgat
gaattggaatttgaatatgatactttagctcacagactcagagaattagcctttttaaac
aaaggtataaaaatttcattaacagatgaaagatatgataaaaaagaaatgttccactat
gagggtggattaagatcttttgtactttatttaaatagaaataaggaaaaattacatcaa
caacctatatatgttgatgaaaataaagatggatgtatagttgagattgctatgcaatat
aacgatggttatgcagaaaatattttttcctttgctaacaatatagacacaatagaaggt
ggaactcatttagctggatttaaatcagctctaacaagagttataaatgactatgctagg
aaatttaattacttaaaggatacagataaaaatttatcaggggatgatgttagagaggga
ttaacagcagttatttcagtaaaattaacagatcctcaatttgaaggacagacaaagaca
aaattaggaaatggtgaagtaagaggaattgtagatacaatagtaggtcagagtataggt
tcttttttagaggaaaatcctaatgtaggtaaaataataattgaaaaaggcctatcagct
tcaagagctagagaggctgcaaaaagagcaagagaacttactagaagaaaatctatttta
gaaagcacgtctcttccaggaaaattatcagattgttcttcaaaggatccatcattatgt
gaaatttatttagtcgaaggagattccgcaggtggatctgcaaaacagggaagaaataga
gaattccaagctatattacctttaaagggtaaaataatgaatgtggaaaagcaaagattg
gataaaatattagcttcagatgaaatacgtgctatgataactgcatttggagcaggtata
ggaaaagaatttgatattgataaaataagatataatagaataattataatgacagatgct
gacgtagatggagcccatataagaactttacttttaacattcttttatagatacatgaaa
gaattaatagaggaaggtcatgtttatatagctcaaccaccactttatagaatatataag
gctaaaaaagaaatttatgtttattcagatccagaattggatgctgcattattagaattg
ggtggaaaagataccaatactaatattcaaagatacaaaggtcttggagaaatgaatcca
gaacaactttgggaaactactatggacccagaacatagaactttattacaggtaacagta
gaggacgctatggaggcagatgaaatatttactatacttatgggaacaaaagtagaacca
agaagagactttatagaaagtaatgctgataaagtagttaacttggatatataa
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