Clostridium botulinum A ATCC 3502: CBO0256
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Entry
CBO0256 CDS
T00533
Name
(GenBank) putative exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03030
DNA replication
cbo03430
Mismatch repair
cbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBO0256
03430 Mismatch repair
CBO0256
03440 Homologous recombination
CBO0256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbo03032
]
CBO0256
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO0256
Enzymes [BR:
cbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBO0256
DNA replication proteins [BR:
cbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBO0256
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBO0256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DNA_pol_A_exo1
MlaA
Motif
Other DBs
NCBI-ProteinID:
CAL81808
UniProt:
A5HYE9
LinkDB
All DBs
Position
303020..303949
Genome browser
AA seq
309 aa
AA seq
DB search
MNFVAIDFETANEKRNSPCSIGIVVVKDGEIVEKVHYLIKPKEMRFMPINIGIHGIRPHM
VQDELEFDKIWGKIKGYFNNNLVIAHNASFDMSVLRSTLKLYNIKMPSFEYICTMKLSKN
FYSNIDNARLNTVNNFLGYKFKHHDALADAMACSNILINISKELNSKDINEISKLIGVTL
GYVNEDGCKPSSIKGRILKRSNRQAPRENKKIIESFNFTAFKEEVVVFTGGLASMTRNEA
MILVGKLNGTVGSSVTKKTTYLVTNTKDIEDLNREEMSNKLKKAIDLKKKGQNIKFLNEE
AFLQKCKEK
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaattttgtagctatagattttgaaactgctaatgaaaaaagaaatagtccatgctct
ataggtatcgtggttgtgaaagatggggagattgtagaaaaagtacattatttaataaag
cctaaggaaatgagatttatgccaataaatattggaattcatggaataaggccgcatatg
gtccaggatgaattagaatttgataaaatatggggaaaaattaagggctattttaataat
aatttagtaatagctcataatgcttcctttgatatgtctgtattaaggagtacattaaaa
ctttataatataaaaatgccaagttttgagtatatatgtacaatgaagctttctaaaaat
ttttatagtaacattgataatgcaagattaaatacagtaaataattttttggggtacaag
tttaaacatcatgatgctctggcagatgcaatggcatgtagtaatattttaattaatata
tcaaaggaattaaattcaaaggatattaatgaaatatcaaaattaattggagtgacttta
ggatatgtaaatgaagatggatgtaaaccatcttccattaaaggaaggattttaaaaaga
tctaatagacaagctccaagggaaaataaaaagataatagaaagctttaatttcactgca
tttaaagaagaggttgttgtatttacaggtggattagcttctatgacaagaaatgaagca
atgatattagttggaaagcttaatggaactgttggaagctctgtaactaagaagacaaca
tacttagttacaaatacaaaggacatagaggatttaaatagagaagaaatgagcaataag
cttaagaaagccatagatttaaagaaaaaaggtcagaatataaagtttttaaacgaggaa
gcattcctacaaaaatgtaaagaaaaataa
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