Clostridium botulinum A ATCC 3502: CBO0472
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Entry
CBO0472 CDS
T00533
Symbol
sbcD
Name
(GenBank) nuclease subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cbo
Clostridium botulinum A ATCC 3502
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO0472 (sbcD)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBO0472 (sbcD)
Archaeal homologous recombinant proteins
CBO0472 (sbcD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
DUF7235
Hat1_N
Motif
Other DBs
NCBI-ProteinID:
CAL82025
UniProt:
A5HZ16
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All DBs
Position
557819..559048
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AA seq
409 aa
AA seq
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MRILHTSDWHLGKNLEGFSRMDEQERFIEDFINIVDKNNIDMVIIAGDIYDNGNPPARAE
KMFYDCIKKISNKGERLVLIIAGNHDNPERLVAASSLAYDEGIILMGTPKTIVPKGKYGN
FKVINSDLACLEIGVKEEKAVIISLPYPSEKRLNEILSKEMDNDEDRRKTYSERIGDIFS
NLQEKYYKDNTVNLAISHIFVNGSEETDSERPIQLGGSLSVDVDKLPKKAQYIGLGHLHK
PQKVRGIDNAYYSGSPLPYSKSERGYSKGCKIIDVHPGEKAVIEEVYFNNYKPIEVWHCN
GIKEAINKCEENKEKDMWLYLHIKTKEYISTEDIKALKEIKKDIVEIVPEIEEKREETFN
GNIKEKSMAELFKSFYLNQRGIEASEELMDLFLSIAQEEDEYETEETCD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgagaatattgcatacctccgattggcacttgggaaagaaccttgaaggctttagtaga
atggatgaacaggaaagatttatagaggattttattaacattgtggataaaaataatata
gatatggtgataatagctggagatatatatgataacgggaatccaccggctagagcagaa
aaaatgttttatgattgtataaaaaaaataagcaataagggagaaagattagttttaatt
atagcaggtaatcacgataatccagaaagattagttgctgcaagttctttagcctatgat
gagggaataatacttatggggacccctaagactatagttccaaagggaaagtatgggaat
tttaaggtaataaattcagatttagcctgtttagaaataggggtaaaggaagaaaaggca
gtgattatatctttaccttatcctagtgagaaaagattaaatgaaatactgtctaaagaa
atggataatgatgaggatagaagaaaaacttattcagaaaggataggagatatattttct
aatttacaggaaaaatattataaagataacactgttaatttagctatttctcatatattt
gtaaatggatcagaggaaacggattctgaaaggccaatacaacttggagggagtctatca
gtagatgtagacaagttacctaaaaaagcacaatatataggccttgggcatcttcataaa
ccacaaaaggtaagggggatagataatgcctattattctggttcaccactgccttatagt
aaaagcgaaagaggatatagtaaaggatgcaagataatagatgtacatccaggggagaaa
gctgttattgaagaggtttattttaataactataaacctatagaggtgtggcattgcaac
ggtataaaagaggctataaataaatgtgaagaaaataaagaaaaggatatgtggctatat
ttacatataaaaacaaaggaatatataagtacagaagatataaaagccttaaaagaaata
aaaaaagatatagtagagatagtaccagaaatagaggaaaaaagagaagaaacttttaat
ggaaatataaaagaaaaatctatggcagaattatttaaatccttttatttaaatcaaaga
ggaatagaggctagtgaagaattaatggatttatttttaagtatagctcaagaggaggat
gaatatgaaaccgaagaaacttgtgattaa
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