Clostridium botulinum A ATCC 3502: CBO0473
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Entry
CBO0473 CDS
T00533
Symbol
sbcC
Name
(GenBank) exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cbo
Clostridium botulinum A ATCC 3502
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO0473 (sbcC)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CBO0473 (sbcC)
Archaeal homologous recombinant proteins
CBO0473 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_27
ABC_tran
ATP_bind_1
GFO_IDH_MocA_C2
Motif
Other DBs
NCBI-ProteinID:
CAL82026
UniProt:
A5HZ17
LinkDB
All DBs
Position
559023..562553
Genome browser
AA seq
1176 aa
AA seq
DB search
MKPKKLVIKGLNSFIEKQEIDFETLVNRGLFGIFGPTGSGKSSILDAITMALYGDIARDS
TQFINLDTDSLFVSYEFQIASVDERDDYIVSRTVKRDKKGGYKTTAARLVKNTYEEEEII
ADKPRDIQKNIESIIGLTAEDFTRSVVLPQGKFSEFLKLSGKSRRDMLERIFGLEKYGKK
LLERIRKARNKEISSLTLIEGRLEQYKDISKEKLQELKIQYENLLKEKSKIAKEKEESNK
LYEKYKNIWELQEELNIYLNKLENLKKGLLNIEEKRIKVEKGKNALSVKPYIDELSKIES
DRNINEEELQTAMEQLRNIDLNLKNIEEEYKKASEDKEEKIPLLMQKENNLLQAIEIKKK
VEVIKRERADLVQKYKEKESLIRNKNIDKKHIEENINKISKEVKLKEEEINSLKIDGDRR
EKIQKLYEIDKEYKRLNLEVCNITERINIKIKSLKEYELKYKDTLETQRDINKKLEYVSG
KREDLIKNSPGNNDILLDKKDYINKLMEIFNDLNKINDRKQELEKNLKEKQVVKLNLEKQ
HKEILEILKLKEETIVSLEEKIKDIEKMDMASILATNLKDQEPCPVCGSMHHIKLAKKVD
IKELEILKEDHRNAFKKLENIKIEEKEKNILLISVEKEEELILEELENLKEQLKGRNLED
LRGELQKEKNDFEKLNENIKDWEKEKLILEENINKLQKEKNDIDKEEAKNHEAISKEKEL
IASIKKDMEEREILFKEKEKEYLNLKEEIKVSNVEEEISRVRASDKKIEEYNKVIKNERE
ILESENNKREETIKQINIMEIELGKIIEAGKEKKNFIDKEEEEIKKLNVGEISIEHLDQV
KKSIGNIKEKEEILKSKLELEGKNREILWKNKISKEQIKINLEKLHNEKYIQLNKVLEEN
KFHTLEDAKLMLICKEEIKELEKEIEEFEKEYNSLNINIERVNKKLKGERIEEGSWKDIR
LKKENKEKELEDIIKNIVIEEKLISDMENNIKSLKNLLDEKEKVAHKKALLEDIDKLVQG
NKFVEFVAMNQLEYIVFEASKRLKDITRGRYALELDCNGNFTMRDDFNGGGIRPTNTLSG
GETFLTSLALALALSSQIQLKGSSPLEFFFLDEGFGTLDSELLDTVMTSLENLRSDRLSV
GIISHVEELKNRVPIKLIVDPAVPGEGGSKIKIEYS
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaagaaacttgtgattaaaggactaaacagttttatagaaaaacaggaaata
gactttgaaactttagtcaatagaggtttgtttggcatatttggccctacaggcagtgga
aaatccagtatattagatgctataactatggctttatatggagatatagcaagagatagt
actcagtttataaatttagatacggattctttatttgtaagctatgagtttcagatagcc
tcagtagatgaaagagatgattatattgtttctagaactgtaaaaagagataaaaaaggt
ggttataagactaccgcagctaggttagttaaaaatacttacgaggaagaagaaataata
gcagataagccgagagatatacaaaaaaatatagaatctataataggattaaccgcagaa
gattttactcgttcagtagtgttgccacaaggtaaatttagtgagttcttgaagttaagt
ggaaaaagtagaagagatatgttagagagaatatttggattagagaagtatggcaaaaaa
cttttagaaaggataagaaaagcaagaaataaggaaatatcctctttaacattaatagaa
ggaagattagaacagtataaagatatatccaaggaaaaattacaggaactaaaaatacaa
tatgaaaatttgttaaaagaaaaatctaaaatagcgaaagaaaaagaagaaagcaataag
ctttatgaaaagtataaaaatatatgggaacttcaagaggaattaaatatttatttaaat
aaattagaaaatcttaaaaaagggttgctaaatattgaagagaaaagaataaaagtagaa
aagggaaagaatgcattaagtgttaaaccctatatagatgaacttagcaaaattgaatca
gatagaaatataaatgaagaggaattacaaactgcaatggagcagttaagaaatatagat
ttaaatttaaaaaatatagaagaagaatacaagaaagcatcagaggataaagaagaaaaa
atacctttattaatgcagaaagaaaataatttactacaggctatagaaataaagaagaag
gttgaagttataaaaagggaaagagcagatttagtacaaaaatataaggaaaaggaaagc
ttaataagaaacaaaaatatagataaaaagcatatagaggaaaatataaataagatttct
aaggaagtaaaattaaaagaagaagaaataaattcattaaaaatagatggagacagaaga
gaaaagatacaaaaactatatgaaatagataaagaatataaaagattaaatttagaagtt
tgcaatataacagaaagaataaatataaaaataaagagcttaaaagagtatgaattaaag
tataaagatacattagaaacacaaagagatataaataaaaaattagaatatgtttcaggc
aaaagagaagatttaataaaaaactctcctggtaacaatgatattttgcttgataaaaaa
gattatataaataaattaatggaaatttttaatgatttaaataaaataaatgatagaaaa
caggaattagaaaaaaatttaaaagaaaaacaagtagtaaaattaaatttagaaaaacag
cataaagaaatattagaaatattaaagcttaaagaagaaacaattgtaagtctagaggaa
aaaataaaagatatagaaaaaatggatatggcctccatattagctactaatttaaaggat
caagaaccttgtcctgtatgtggatctatgcatcatattaaattagctaaaaaggttgat
ataaaagaattagaaattctaaaagaagatcatagaaatgcatttaaaaaattagaaaat
ataaaaatagaagaaaaagaaaaaaatatacttttaatttctgtggaaaaagaagaagaa
ttaatattagaggaattagaaaatttaaaagagcaattaaaaggtagaaacttagaggat
ttaaggggagaactacaaaaagaaaaaaatgattttgaaaaattaaatgaaaatataaaa
gactgggaaaaagaaaaattaatattagaagaaaatataaacaagctacaaaaagaaaaa
aacgatatagataaagaggaagctaaaaatcatgaagctatatcaaaggaaaaagaatta
atagcttctataaaaaaggacatggaagaaagagaaatattatttaaggaaaaagaaaaa
gaatatttaaatttaaaagaagaaattaaagtttctaatgtggaagaagaaataagtaga
gttagagcttctgataaaaaaatagaggaatataataaggttataaaaaatgaaagagaa
attttagagagtgaaaataataaaagagaagaaacaattaaacagataaatattatggaa
atagagctaggcaaaataatagaagcgggaaaagaaaagaaaaattttatagacaaagaa
gaggaggaaataaaaaaattaaatgtgggagagatttctatagaacatttagaccaagta
aaaaaatccataggaaatataaaggaaaaagaagaaatcttaaaatctaagttagagttg
gaaggtaaaaacagagaaatattatggaaaaataaaataagtaaagaacaaataaaaatt
aacttagaaaaacttcataatgaaaaatatattcagttaaataaggtcttagaggaaaat
aaattccatactttagaagatgcaaaattaatgttaatatgtaaagaagaaataaaagag
ctagaaaaagagatagaagaatttgaaaaagagtataatagtttgaatataaatatagaa
agagtaaataaaaaattgaagggggaaaggatagaggaaggaagttggaaagatataagg
cttaaaaaagaaaataaggaaaaagagctagaagatataattaagaatattgtaatagaa
gaaaagcttataagtgatatggaaaataatataaagtcattaaagaacttattagatgaa
aaagaaaaggtagctcataaaaaggctttattagaagatatagataaattagttcaggga
aataaatttgtagagtttgtggctatgaatcagttagagtatatagtttttgaagcttct
aaaagacttaaggatataacgagaggaagatatgcattagaattagattgtaatggaaac
tttactatgagggatgactttaatggagggggtataagacctacaaatactttgtctgga
ggggaaaccttcttaacatcattggcactagctttggcgctatcttcacagatacaacta
aaaggaagctcccctttagaatttttctttttagatgagggatttggaactttagatagt
gagcttttagatacagttatgacttccttagaaaatttaagaagtgatagattaagtgta
ggaataataagtcatgtagaggaacttaaaaatagagtaccaataaagcttatagtagat
cctgcggtaccaggagagggtggaagtaaaataaaaatagagtatagctag
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