Clostridium botulinum A ATCC 3502: CBO1456
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Entry
CBO1456 CDS
T00533
Symbol
spoVD
Name
(GenBank) putative sporulation specific penicillin-binding protein (stage V sporulation protein D)
KO
K08384
stage V sporulation protein D (sporulation-specific penicillin-binding protein)
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo00550
Peptidoglycan biosynthesis
cbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBO1456 (spoVD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbo01011
]
CBO1456 (spoVD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbo01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CBO1456 (spoVD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PASTA
PBP_dimer
PBP_dimer_2
Beta-lactamase
IP_trans
Motif
Other DBs
NCBI-ProteinID:
CAL82999
UniProt:
A5I1T5
LinkDB
All DBs
Position
1587887..1590067
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AA seq
726 aa
AA seq
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MSNSKYRDKVIIRKRMMFIFALLILAFIGLVIKMGTIMIGQSPELKKKAVDQWTSEVKID
AKRGRILDRNGNELAVSANVYRVDLDMNTLRSTMEEKKLSKNDVASKLSKALDMEQKEVE
KVLNKKLPSGLPLASATLKRRIEKDKADKVRDLDLRGILVSADTKRYYPNNNFLSHVLGH
TNSDGKGLTGVELYYNNILSGKPGVRIAETDNKSKELPYTISEYTKPEDGKDLVLTIDEM
IQHFSEKTAEQALKDNKAKAVSVVVMDPRTGEVLAMANKPDYNPNDPWQEGKSYEELQQN
WRNRSVNDTFEPGSVFKVFTAATALEENLITSEDKFTCGGSITIGKRTIRCWKSGGHGTQ
NFIEILKNSCNVGFAQLGHKIGKEKLNSYIQKFGFGKKTGIDLPGEAPGITKKTENISDI
DLATISFGQANTLSIVQYLQAFNAVANGGNLIKPHVMKEVGHFDEEKNKEIIEKKNTIES
KQILNSQKMATLRSYLEKVVSEGGGKKAYIAGYHIGGKTGTAQKAGKGGYMPGKYVASFA
GMAPADNPRITVFVSIDEPDPSNYYAGQIAAPAAQGLFKDIFNYLALKSDAQGEDIAKSL
LKDITIPEVRGKSKEEAQKILKDLKLDCEIQSEGEYIVDMNPKPGYTVKEGSKIVLYTGN
SQNYNKVVVVPNVKGYTVEQAMSVLNSIGLRGDIQGDGIISHQSIEANKEVKKGTMVNLK
AEPIGD
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttgtcaaatagtaagtacagagacaaagtaataattagaaaaagaatgatgtttatattt
gctcttctaattttagcttttataggtttagtaataaaaatgggaactataatgataggt
cagtctccagagttgaaaaaaaaagctgtggatcaatggacaagtgaagtaaaaattgat
gctaaaagaggtagaatattagacagaaatggtaatgaactagcagtaagtgctaatgta
tacagagtagatttagatatgaatactttaagaagtaccatggaagaaaaaaaactatct
aaaaatgacgtagcatcaaaactttcaaaagcattagatatggaacaaaaagaagtagaa
aaagtattgaataaaaagcttccaagtggattacctttagcctctgctactttaaaaaga
agaatagaaaaggacaaggctgacaaagtaagagatttagatttaagagggattttagta
tctgcggacactaaaagatactatcctaataataattttttatctcatgtattaggacat
acaaattctgatggaaagggacttacaggagtagagttatactataacaatatattatca
ggtaagccaggagtaaggattgctgaaacggataataaaagcaaggaattaccttatacc
atttcagaatacactaaaccagaggatgggaaagatttagtattaaccatagatgaaatg
atacaacactttagtgagaaaacagcagagcaagctttaaaggataataaagcaaaggca
gtatctgtagtagtaatggatcctagaactggagaagtactagctatggcaaataagcca
gattataatcctaatgatccttggcaggaagggaaaagctatgaagaacttcaacaaaac
tggagaaatagatcggttaatgatacttttgaaccaggatctgtatttaaagtttttaca
gcagctaccgctttagaggaaaatttaataacctccgaggataagtttacttgtggtgga
agcataactatagggaaaagaactatacgttgctggaaaagcggagggcatggtactcaa
aattttatagaaatacttaaaaactcttgtaacgtaggttttgcacagttaggtcataag
ataggtaaagaaaaattaaattcatatattcaaaaatttggttttggtaaaaaaactggt
atagatcttccaggagaagctccagggataacaaagaaaacggaaaatatatcagatata
gatttagctacaatatcctttggtcaagctaacacgttgtctatagtacaatatctccaa
gcttttaatgcagtggctaatggaggaaatcttataaaacctcatgttatgaaagaagta
ggacattttgatgaggaaaaaaataaagaaataatagaaaagaaaaataccatagaaagc
aagcaaattttaaatagtcaaaagatggctaccctaagaagctacttagaaaaagtagtg
tcagaagggggcggtaagaaggcttatatagcaggttatcatataggtggcaaaactggt
acagctcaaaaggctggtaagggtggatatatgcctggtaaatatgtagcttcctttgca
ggaatggcaccagctgataatccaagaataacagtatttgtttctattgatgaaccggat
ccttcaaattactatgcaggccaaatagcagctccagcagcacaggggctattcaaagat
atatttaattatttggcattaaaaagtgatgcccaaggggaagatatagctaaaagtctt
ctaaaggatataactattcctgaagttagaggtaagtcaaaagaagaagcacaaaaaata
ttaaaagatttaaaattagattgtgagatacaatctgagggagaatatatagtagatatg
aatcctaaaccagggtatactgtaaaagaaggcagtaaaattgttctttacacagggaac
agtcaaaattataataaagtagtagttgttccgaatgtaaaagggtatacagtagaacag
gccatgtctgtattaaatagtataggcttaagaggggatatacagggtgatggaattatt
tctcatcaaagtatagaagcaaataaggaagttaaaaaaggaactatggttaacttaaaa
gcagaaccaataggagattaa
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