Clostridium botulinum A ATCC 3502: CBO2056
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Entry
CBO2056 CDS
T00533
Symbol
rmlB
Name
(GenBank) putative dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo00521
Streptomycin biosynthesis
cbo00523
Polyketide sugar unit biosynthesis
cbo00525
Acarbose and validamycin biosynthesis
cbo00541
Biosynthesis of various nucleotide sugars
cbo01100
Metabolic pathways
cbo01110
Biosynthesis of secondary metabolites
cbo01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CBO2056 (rmlB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CBO2056 (rmlB)
01055 Biosynthesis of vancomycin group antibiotics
CBO2056 (rmlB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CBO2056 (rmlB)
00525 Acarbose and validamycin biosynthesis
CBO2056 (rmlB)
Enzymes [BR:
cbo01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CBO2056 (rmlB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
3Beta_HSD
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
CAL83595
UniProt:
A5I3H7
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All DBs
Position
2196559..2197539
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AA seq
326 aa
AA seq
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MRVLLVTGGAGFIGSNFIRYFLETNKDFIVVNYDKLTYAGNLNNLKEVEMLPTYRFVKGD
ICDSEEFNRTLKKYNPDYIINFAAESHVDRSINGPSVFGQTNFMGTLNLLQCAHEFWGSS
CADKRFLQVSTDEVYGSIENDSDYFIEDSNLMPNSPYSASKAGADMMVRAFGRTYGLPVI
ITRCCNNYGPYQYSEKLIPICIIKALNDEPIPIYGDGTNIREWIHVSDHCSAIIKALFYG
TPGEVYNIGSGEEVSNVDMAKIILSNLSKPTDAIKKVNDRLGHDRRYALDSSKIKNQLSW
ACSYKLEEGIKETIEWYKNNQTWWND
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgagagttttacttgtaacaggtggtgcaggctttattggcagcaattttatacgatac
tttctggaaacaaacaaagactttattgtagttaattatgataagcttacctatgctgga
aaccttaataatttaaaggaagttgaaatgcttccgacttatcgctttgttaagggcgat
atatgtgacagcgaggaattcaataggacattgaagaagtataaccctgactatataatc
aattttgctgctgaatcgcatgtagatagaagtataaatggaccttcagtatttggtcaa
acgaactttatgggaacacttaatttactccagtgtgctcatgaattttggggtagcagc
tgtgcggacaagcgttttttgcaggtctcaacggatgaagtatatggaagtattgagaat
gacagcgattattttatagaagattcaaatctcatgcctaacagtccttattcagcctca
aaggcaggagcagatatgatggtaagagcctttgggagaacttacggacttcctgttata
attacaagatgctgtaataattatggaccgtaccaatacagtgagaagcttattcctatc
tgtattataaaagctttaaatgatgagcctataccaatatatggtgatggcacaaatata
agagaatggattcatgtatcagatcactgttctgcaattataaaagcgttattttatggt
acgccaggagaagtttacaatattggaagtggagaagaggtttcaaatgttgatatggca
aagataattcttagtaatcttagcaaaccaacggatgccataaaaaaagtgaatgacagg
ttgggccatgacagacggtatgcgttggatagcagtaaaataaaaaaccagttaagctgg
gcttgcagctataagctggaagaaggaatcaaggaaacaattgaatggtataaaaataac
cagacctggtggaatgattaa
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