Clostridium botulinum A ATCC 3502: CBO2416
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Entry
CBO2416 CDS
T00533
Name
(GenBank) putative tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbo03016
]
CBO2416
Enzymes [BR:
cbo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CBO2416
Transfer RNA biogenesis [BR:
cbo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CBO2416
Prokaryotic type
CBO2416
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL83962
UniProt:
A5I4J0
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All DBs
Position
complement(2546277..2547146)
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AA seq
289 aa
AA seq
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MDGVINVLKPKGITSFDVVRDIRKIAKIKKVGHTGTLDPLASGVLPVCIGKATKIVDYIM
EGTKTYRVEMKLGTTTDTYDREGTVLEEKEIDLTPIEVEETIKKYIGDIDQVPPMYSALK
INGQKLYDLARKGIEVEREARKIHIYDICILSIDLPYVIFDVKCSKGTYIRSLCFDIGKD
LDSGAVMWNLQRLEASPFNIKEAIKLEDLNEENIKQYITPIDEALKDYEKLSLDKKFEKL
VLNGVILKDRRVLDNIEENKLYRTYIEDDNFIGLGMKNAYGFKIHKLLT
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggatggagtaataaatgttttaaaaccaaaggggataacatcctttgatgtagttaga
gacataagaaaaatagcgaaaataaaaaaagtcggtcatacaggtacattagatccctta
gcttctggtgttctccctgtatgtataggtaaggctaccaaaatagttgattatataatg
gaaggaactaaaacctacagagtagaaatgaaacttggaactaccacagacacttatgat
agagaaggtactgtattagaggaaaaagaaatagatctaactcctatagaggtagaagag
actattaaaaaatatataggagacatagatcaagtacctcctatgtattctgccttaaaa
attaatggacaaaaactttatgacttggccagaaaaggtatagaagtagaaagagaagca
agaaaaatacatatatatgatatatgtattttaagtatagatttgccctatgttatattt
gatgttaagtgttcaaagggaacttatataagaagtttgtgttttgatataggaaaggat
ttagattctggagcagtaatgtggaatctacaaagattagaagcaagcccctttaatata
aaagaagcaataaaattagaagatttaaatgaggaaaatataaaacagtatataacacct
atagatgaagctttaaaggattatgaaaaattatctttagataaaaaatttgaaaaactt
gtactaaatggtgtaatattaaaagatagaagagttctagataatatagaagaaaataaa
ctatatagaacttatatagaagatgataattttataggattaggaatgaaaaatgcatat
ggatttaaaattcataaattattaacttag
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