Clostridium botulinum A ATCC 3502: CBO2826
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Entry
CBO2826 CDS
T00533
Symbol
ligT
Name
(GenBank) putative 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cbo03016
]
CBO2826 (ligT)
Enzymes [BR:
cbo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CBO2826 (ligT)
Transfer RNA biogenesis [BR:
cbo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CBO2826 (ligT)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
CAL84389
UniProt:
A5I5R2
LinkDB
All DBs
Position
complement(2997570..2998097)
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AA seq
175 aa
AA seq
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MRVFYAVTFYEEAKEKLIEYKNIVVNNSVKGRFTNKNNFHLTLEFIGEVDEKKLSLLTNI
LYKLQNPPKEVVTSYIGSFKRRDKEIIWLGIEENKCLITLQRELRNLLINNGFQIEDRKY
KPHITIGREIVRKGFIEKNIFPPLHIPIASIALMESKRVNNQLVYEPLEEQILVV
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgagagtattttatgcagttacattttatgaagaagcaaaagaaaaattaatagagtat
aaaaatatagttgttaataactcagttaaaggtagattcacaaataaaaataattttcat
ttaactttggagtttataggtgaagttgatgaaaaaaagttatctttactaactaatata
ctatataagttacagaatccacctaaggaagtggttacttcctatattggctcatttaaa
aggagagataaggagataatttggcttggaattgaagaaaataaatgccttatcacattg
caaagagaattaagaaatttattaattaataatggattccaaattgaggatagaaaatat
aagcctcatattacaattggtagagaaatagtaagaaagggttttatagagaaaaatatt
tttccacctctacatattccaatagcttcaatagctcttatggaaagcaagagagttaat
aaccagttagtttacgaaccattagaagagcaaattttagtagtataa
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