KEGG   Clostridium botulinum A ATCC 3502: CBO2938
Entry
CBO2938           CDS       T00533                                 
Symbol
sigA
Name
(GenBank) RNA polymerase sigma factor (sigma-43)
  KO
K03086  RNA polymerase primary sigma factor
Organism
cbo  Clostridium botulinum A ATCC 3502
Pathway
cbo02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:cbo00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CBO2938 (sigA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cbo03021]
    CBO2938 (sigA)
Transcription machinery [BR:cbo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CBO2938 (sigA)
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_1 Sigma70_r1_2 HTH_PafC Exonuc_VII_L
Other DBs
NCBI-ProteinID: CAL84500
UniProt: A5I618
LinkDB
Position
complement(3126246..3127331)
AA seq 361 aa
MKEKKNNAKDKNEKMKLVRRLIDKGKKSGSLSYKEIMDELEEIDLSPEQIEKIYDVLESM
GVEVTGDMNDIDVKEEDIDLSVPEGIAIDDPVRMYLKEIGKVALLTSEEEIELAQRIEAG
DMVAKKKLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNLGLIKAVEKFDYRKGYKFSTYA
TWWIRQAITRAIADQARTIRIPVHMVETINKLIRVSRQLLQELGREPQPEEVAKIMEMPV
DKVREIMKIAQEPVSLETPIGEEEDSHLGDFIPDDEAPAPAEAAAFTMLKEQLINVLDTL
TPREEKVLRLRFGLDDGRARTLEEVGKEFNVTRERIRQIEAKALRKLRHPSRSKKLKDYL
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgaaagaaaagaagaataatgctaaagataaaaatgaaaaaatgaagttagttagacgc
ttaatagataaaggtaaaaaaagtggatcattaagttataaagaaattatggatgaatta
gaagaaatagatttaagtccagaacaaatcgaaaaaatatacgatgtattagagtctatg
ggtgtggaagttacaggtgatatgaatgatatagacgtaaaggaagaggatattgattta
tcagttccggaaggtattgctatagatgatcctgttagaatgtatttaaaagaaataggg
aaagtagcattattaacttcagaagaagaaatagaattagcacaaagaatagaagcagga
gatatggttgctaagaagaaattagcagaggctaatttaagacttgttgtaagcattgca
aagagatatgtaggaagaggaatgttatttttagatcttatacaagaaggtaacctagga
ttaataaaagctgtagaaaaatttgactatagaaaaggttacaaatttagtacctatgct
acttggtggataaggcaggccattacaagggctatagcagatcaagcaagaaccataaga
ataccagttcacatggtagaaactataaataagcttataagagtatcaagacaactatta
caagaactaggtagggagccacagccagaggaagtggctaagattatggaaatgcctgtg
gataaagtaagggaaataatgaaaatagctcaagagcctgtttctttagaaactccgatt
ggtgaagaggaagatagtcatttaggagactttattccagatgatgaagcaccggcgccg
gcagaagcagcagcctttacaatgttaaaagagcaacttattaatgttttagatacatta
acaccaagagaagaaaaggtattgagattaagatttggtttggatgatggaagagccaga
actttagaggaagttggaaaagaatttaatgtaacaagagaaagaataagacagatagaa
gcaaaagccctaagaaaattaagacacccaagtagaagtaaaaaattaaaagattattta
gattaa

DBGET integrated database retrieval system