Clostridium botulinum A ATCC 3502: CBO3271
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Entry
CBO3271 CDS
T00533
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03420
Nucleotide excision repair
cbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBO3271 (pcrA)
03430 Mismatch repair
CBO3271 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO3271 (pcrA)
Enzymes [BR:
cbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBO3271 (pcrA)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBO3271 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CBO3271 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
AAA_12
Motif
Other DBs
NCBI-ProteinID:
CAL84830
UniProt:
A5I6Z8
LinkDB
All DBs
Position
complement(3476497..3478713)
Genome browser
AA seq
738 aa
AA seq
DB search
MDLKNKLNKEQYEAAITIDGPLLILAGAGSGKTRVLTYRIAHMIENLNIYPSKILAITFT
NKAAGEMKERIKALVGDVVEGMWVSTFHSSCVRILRREIDKLGYDKNFTIYDTYDQKTLV
KQCMEELNINDKEITDREIINTIGNQKDNLISPKEFKKISNGNYRKDRIADAYILYQKKL
KTNNALDFDDLIYKTVELFKTNKDVLEFYQRKFKYIMVDEYQDTNKSQYELVKLLALVHR
NMCVVGDDDQCIYEWRGADISNILNFEKDYKEAKVIKLEQNYRSKGNILNAANEVIKNNS
QRKNKVLRTENENGNKIKVFRAYSDIDEAKFVASEIKKIIKDSERSFNDFAVLYRTNAQS
RIFEDVFMKRDIPYRLIGGLKFYDRKEIKDLMAYLKLINNPLDDISLRRIINVPKRSIGD
ATVKKVQEFANEMDECMYSVLLDADQILTLSQRSITSIKKFVSIMNSFIRKKDEISVSAL
IKEILEETGYLKELKNSKNPDDVSRVENLKELVSAAADFERESEDKSLGAFLEKVALVTD
IDNYDENSDSVAMMTVHSAKGLEFPVVFMVGMENGIFPGTQSLSDPKEMEESRRLCYVAI
TRAKEQLYITSAEIRKVFGRTVAYALSDFVSEISKDLKDNVNITGEVATDKVLHKNFGIR
SQKTNSINSYKSPSLNNIPKNNVDSNKLNVGLKVKHKDFGIGTIVSMSKVSDDIKLTIAF
DRRGVKILMLSMAPIEAV
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaaataaattaaataaagaacaatatgaagctgctattactatagatggg
cctttactaatactcgcaggagcaggttcaggcaagacaagggttttgacttatagaata
gcccacatgatagaaaatttaaatatatatccttctaaaattttggccataacttttaca
aataaggctgctggagaaatgaaagaaagaataaaggctttagtaggggatgtggtagaa
ggaatgtgggtttctacatttcactctagctgtgtaaggattttaagaagagaaatagat
aagttaggttatgataaaaattttactatatatgatacttatgatcaaaaaactttagtt
aagcaatgtatggaagaattgaatataaatgataaagaaatcacagacagagaaataata
aataccataggcaatcaaaaggataatttaatatcacctaaggaatttaaaaaaatttct
aatggaaattatagaaaagatagaattgcagatgcatatattttataccaaaaaaaatta
aagactaataatgcattagattttgatgatttgatatataaaactgtggagttatttaaa
acaaataaagatgtattagaattttaccaaagaaaatttaaatatataatggtggatgaa
tatcaagatactaataaatctcaatatgaattagttaaattattagctttagttcataga
aatatgtgtgtagttggtgatgatgatcaatgtatatatgaatggagaggggcagatata
agcaatatattaaattttgagaaggattataaagaagctaaggttataaaattagagcaa
aattataggtcaaagggtaatatattaaatgctgctaatgaggttataaaaaataattct
caaagaaaaaataaagttttaagaactgaaaatgaaaatggaaacaagataaaagtattt
agagcatattctgatatagatgaagcaaaatttgtagcttccgaaatcaaaaaaataata
aaggatagtgaaagatcttttaatgattttgcagttttatatagaactaacgcccaatcc
cgtatttttgaagatgtgtttatgaaaagagatatcccttatagattaataggtggatta
aagttttatgatagaaaagaaataaaggatttaatggcttatttaaagcttataaacaat
ccattagatgatataagtttaaggagaataataaatgttcctaaaaggagtataggtgat
gctacagtaaaaaaagttcaagaatttgcaaatgaaatggatgaatgtatgtatagcgtg
cttttagatgcggatcaaatattaacattgtctcaaagaagtataacatctatcaaaaag
ttcgtaagtataatgaatagctttataagaaaaaaagatgagataagcgtatctgctctt
ataaaagaaatattagaagaaacaggatacttaaaagaattaaaaaattctaagaatcca
gatgatgtaagtagagtagaaaatctgaaagaattagtttccgcagcagcagattttgaa
agagaatcagaagataaatctttaggagcgtttttagaaaaagtagcattggttacagat
atagataattatgatgaaaattcagatagtgttgctatgatgacagtacatagtgctaag
ggattagaatttcctgtagtatttatggtaggtatggaaaatggaatatttccaggaaca
caatcattgtcagatccaaaagaaatggaagagtctagaagactgtgttatgttgctata
acaagagcaaaagaacagttatatataacttcagcagaaattagaaaagtatttggaaga
accgtagcctatgctttatcagattttgtaagtgagatatccaaagatttaaaagataac
gtaaatattactggagaagtagcaactgataaagtattgcataaaaattttggtataaga
tcacaaaaaacaaatagtattaattcttataaatcacctagcttaaataatatacctaaa
aataatgtggattctaataagcttaatgtaggtttaaaggttaagcataaagattttgga
ataggaactatagttagtatgagtaaggtttcggatgacataaagttaactattgctttt
gaccgtagaggtgttaaaatattaatgcttagtatggcgccaattgaagcggtttag
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