Clostridium botulinum A ATCC 3502: CBO3341
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Entry
CBO3341 CDS
T00533
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03420
Nucleotide excision repair
cbo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CBO3341
03430 Mismatch repair
CBO3341
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO3341
Enzymes [BR:
cbo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CBO3341
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CBO3341
MMR (mismatch excision repair)
Other MMR factors
CBO3341
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
DEAD
SLFN-g3_helicase
Viral_helicase1
AAA_30
ResIII
AAA_11
UvrD_C_2
CbiA
NACHT
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
CAL84898
UniProt:
A5I765
LinkDB
All DBs
Position
complement(3568447..3570576)
Genome browser
AA seq
709 aa
AA seq
DB search
MDNNQINNSMDKYIELSMEREYLDFIIDKVRKETGIYLDKRKDIVKDIVEYRKEFLEEDK
NDEDKVVEYFDHERYLKEKLYGFTDKKLKKLTILEQNPYFGKVNFIDEGDEDSIYIGRYG
FLETGNYKPFIVDWRAPICQIFYQGKLGNIAYESPDGKIEVDVKSKRQYVIRKGILKGMF
DSALDVKDEVLQMILSENTKEKLKDIVMTIQEEQDNLIRQPKDKAMIVNGVAGSGKTTIA
LHRVAYLLYNYRNQIQDKVLILGPNNIFVDYISEVLPSLGENGVKQTTFKDFIEDLLPTN
NFLEYDNYIERFIKKDNEFIEDIAYKQSKAYMEDLDCFMEDLERNIFITEDVILMEEVAI
DKKEIDEMLHSYYKYMPLFKRSRKIKRIVFSKIRDVRNKKVYEIQRQYEEKLKKLSEEEL
QLNKNNLEFERKNNIRNIVRKSIELKKSLVWLDNPQVLDIYNEFNNNNKLTVDDIIAILY
LKIKLEGLRYRNEIKHIVIDEAQDYSFLQFVVLKELTDCQSITIVGDVNQRTLPCKDEVP
MLCLDSVFNRVDVEYFNLDKSYRSTKEIIEYANKHLKTNKIVPLVREGDPVKEVTVKNSR
EAIDKVNYYLSYLENKGYENIAIITTTLEQGKVIGSELKKQMYINLIEREDIIYSGGKII
IPSYLSKGLEFDATILILDDNNIGENLKYIMATRALHEMIVVHKEGKKL
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggataataatcagataaataattccatggataaatatatagaactaagtatggaaaga
gaatatttagattttataatagataaagtaagaaaagaaacaggaatatatttagataaa
agaaaagatatagtaaaagatatagtagaatataggaaagaatttttagaagaagataaa
aatgatgaagataaagtagtagagtactttgatcatgaaagatacttaaaagaaaagctt
tatggttttacggataaaaaactaaaaaagctcacaattttagaacagaatccttacttt
ggaaaagttaattttatagatgaaggggatgaagattctatctatataggtagatacgga
tttttagagacaggtaattataaaccttttattgtagattggagagctcctatatgccaa
atattttatcaggggaaattaggaaatatagcatatgaatcaccagatggtaaaatagag
gtagatgtaaaatctaaaaggcaatatgttatccgtaagggtatattaaaaggtatgttt
gattctgctttagatgtaaaagatgaagttcttcaaatgattttaagtgaaaataccaaa
gaaaaattaaaggatatagttatgactatacaagaagagcaagataacttaattagacaa
cctaaagacaaagctatgattgttaatggagttgcaggtagtggtaagactaccattgct
cttcatagagtagcatacttattatataattataggaaccaaatacaagataaagtacta
atactaggacctaataatattttcgtggattatatatcagaagtgttaccgagtctaggt
gaaaatggagttaaacaaactacctttaaggattttatagaagacttgctacctacaaat
aatttcctagaatatgataactatatagaaagatttataaaaaaagataatgaatttata
gaagatatagcatataaacaatctaaagcatatatggaagatttagattgttttatggaa
gatctagaacgaaacatatttattacagaagatgtaatattaatggaagaagttgctata
gataaaaaagaaatagacgaaatgcttcattcctattataaatatatgcctttatttaaa
agaagtaggaagataaaaagaatagtattttctaaaataagagatgtgagaaacaaaaaa
gtttatgaaattcaaagacaatatgaagaaaaactaaaaaaattatcagaggaagaacta
caactaaataaaaataatttagagtttgaaagaaaaaataatataagaaacatagtgaga
aaatctatagagttaaagaaatcattagtatggttagataatccacaggttttggatata
tataatgagtttaataataacaataagcttactgtagatgatattatagctatattatat
ttaaaaataaaattagagggtttaagatataggaatgaaataaaacatatagtaatagat
gaagcacaggattattcatttttacagtttgtagtattaaaagaacttacagattgtcaa
tctataactatagtaggagatgttaatcaaagaacattaccttgcaaggatgaagttcct
atgttatgcttagattctgtctttaatagagtcgatgtagagtattttaatttagataaa
agttatagatcaacaaaagagattatagagtacgctaataaacatttaaaaacaaataaa
attgttcctttggtgagagaaggagaccctgtaaaagaagtaacagtaaagaattcaagg
gaagcaatagataaggttaattattatttaagttatttagaaaataaagggtatgaaaat
attgcaattataacaactacactagaacaggggaaagttataggatcagaattaaaaaag
caaatgtatattaatttaatagagagagaagatataatttattctggaggtaagataata
attccatcttatttatcaaaaggtttagaatttgatgctactattttaatattagatgat
aataatataggagaaaatttaaaatatataatggctacaagagctttacatgaaatgata
gttgtacacaaagaaggtaaaaaattataa
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