Clostridium botulinum A ATCC 3502: CBO3374
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Entry
CBO3374 CDS
T00533
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo03030
DNA replication
cbo03430
Mismatch repair
cbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CBO3374 (dnaE)
03430 Mismatch repair
CBO3374 (dnaE)
03440 Homologous recombination
CBO3374 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cbo03032
]
CBO3374 (dnaE)
03400 DNA repair and recombination proteins [BR:
cbo03400
]
CBO3374 (dnaE)
Enzymes [BR:
cbo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CBO3374 (dnaE)
DNA replication proteins [BR:
cbo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CBO3374 (dnaE)
DNA repair and recombination proteins [BR:
cbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CBO3374 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DNA_pol_IIIA_C
tRNA_anti_2
MotCF
Motif
Other DBs
NCBI-ProteinID:
CAL84933
UniProt:
A5I799
LinkDB
All DBs
Position
complement(3608623..3612180)
Genome browser
AA seq
1185 aa
AA seq
DB search
MGKNQFDEKKPEWVSLHQHTEYSLLDSSAKISDLIKRAKEFGMKSIAITDHGVMYGCVDF
YKEAIKQGIKPIIGCEIYVASKSMYIKQQDKENETHHLVLLVKNEIGYKNLMEIVSKASV
EGFYYKPRVDHEFLKDHSEGLIALSACLGGEVQANILKENLEKAEEVALIYKDIFKEGFY
LELQYHGMEEQLKVNETLVKMSKDLDIPLVATNDVHYIRKEDYKSHDILLCIQTGKTVEE
ENRMRYPSDQFYLKSPEEMYETFSYVPEALENTVKISEECNFDYNFHESKLPKFPLEEGV
DPYEYLREICFKGLFLRYEVLKDFIDKPFSIDEVLVYGDENKEAFDLIERLNYELSIIQQ
MGYVDYFLIVWDFIRFANEKGIMTGPGRGSAAGSLVAYTLGITKIDPIKYNLIFERFLNP
DRISMPDIDSDFCYERRGEVIDYVVEKYGKENVSQIITFGTMAARACIRDVGRAMNYPYA
EVDRIAKMIPTVLNITINKALELNPELKEVYDNEERVRELIDVARALEGLPRHTSTHAAG
VVIASQPLVNYVPLQRNEESIVTQFTMGTLEELGLLKMDFLGLRTLTVMRDAVRIIKENK
EINIDLDNIDFEDKEVYKMIGQGKTVGVFQLESAGMTSFMKELKPDSLEDIIAGISLYRP
GPMAEIPRYIANKNNPLNIEYQTEKLEPILSVTYNCIVYQEQVMQIVRDLAGYSMGRSDL
VRRAMSKKKHDVMEQERRNFIYGNEDQGVKGCINNGIDENVANSLFDSMMDFASYAFNKS
HAAAYAVVGFQTAYLIRYYPTEFIAAMLNSVKGDNDKVSFYVNFAKTLGIEIIAPNINES
YSNFTVKDNRIIFGLTAVKNVGEKGIDNIVLSREQKDKFIDLSDFFNKVDTSIINKRLVE
SLIKAGAFDCLKVYRSKMLAVFEKIMDGIQKQKRNNIEGQVNLFMDIMDNKESSIDIKYP
NIKEFDKKYILQMEKEMTGLYFSGHPLEEYEETLKIQTSHLISDIIPKESLEGNLVDTIS
SIKDGDKVVVGGMITHVSKKLTRNNDMMAFIVLEDLYSSIEVIVFPKIFNMARNIINEDE
VVLLKGRVSLREDEQPKLICEFMEPLVKINSEKLYILVEEKKDIKLKLQEIKGVFLQHKG
NIPVYFCTNKERKKFRIDRELWVNGSRELMDNLRNMFGEDNVKIL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaaatcaatttgatgagaagaagccagagtgggtaagtttacatcaacataca
gagtattcattattagactcttcggcaaaaatatcagatcttataaagagagcaaaagag
tttggtatgaaaagtattgctattacagatcatggagttatgtatggatgtgtagatttt
tataaagaagcgataaaacaaggaataaagcctataataggctgtgaaatatatgtagca
tcaaagtctatgtacataaaacaacaagacaaagaaaatgaaacccatcatttagtattg
ctagtaaagaatgaaatagggtacaaaaacttaatggagatagtatcaaaggcatctgta
gagggattctattataagcctagagtggatcatgaatttttaaaagatcatagtgaagga
ttaatagcattaagtgcatgtttaggaggagaagttcaagctaacatattaaaagaaaat
ttagaaaaagctgaagaagtagcattaatctataaagatatttttaaagaaggattttat
ttagaacttcaatatcatggtatggaagagcaattaaaggttaatgaaacattagttaag
atgtctaaggatttagatatacctttagtggctacaaatgatgtccattatataagaaaa
gaagattataaatcccatgatatattgttatgcatacaaacaggtaaaactgtagaggaa
gaaaatagaatgagatatccatctgatcagttttatttaaaatcaccagaggaaatgtat
gaaaccttttcttatgtaccagaggctttagaaaatacggttaaaatatcagaagaatgt
aattttgattataattttcatgaatcaaaattacccaagtttccactagaagaaggggta
gatccctatgaatacttaagggaaatatgctttaaaggactatttttaagatatgaagta
cttaaagattttatagataaaccctttagtattgatgaagttttagtatatggggatgaa
aataaagaagcttttgatttaatagagagattaaattatgagttatctataatccaacaa
atgggatatgtagattattttttaatagtatgggattttataagatttgctaatgaaaag
ggaataatgacaggcccaggaagaggatctgcagcaggatctttagtagcctatacttta
ggaataactaaaattgaccctattaaatataatctaatatttgaaaggtttctaaatccg
gatcgtatatctatgcctgatatagatagtgatttttgttatgaaagacgaggagaagtt
atagattatgttgtggaaaagtatggaaaagaaaatgtatcacaaataataacttttgga
actatggctgcaagagcctgcataagagatgtaggaagggctatgaattatccttatgca
gaagtagataggatagctaaaatgatacctactgttctaaatataactataaacaaagct
ttagagttgaatccagaattaaaagaggtttatgataacgaagaaagagttagagagcta
atagatgtggcaagggctttggaagggcttccaagacatacatctactcatgccgcaggg
gtagttatagcatcacagcccttagtaaattatgtacctcttcaaagaaatgaagaaagt
atagtaacacaatttacaatgggcactttggaagaactaggacttttgaaaatggatttc
cttggccttagaactcttactgttatgagagatgctgtaagaattataaaagaaaataaa
gaaataaatattgatttagataatattgattttgaagataaagaagtttacaaaatgata
ggacagggtaaaactgtaggagtatttcaattagagtctgctggaatgacatcctttatg
aaggagttaaaaccagattccctagaagatataatagcaggaataagtttatatagacca
ggccctatggctgaaataccaagatatatagctaataaaaataaccctttaaatatagaa
tatcaaacagaaaaactagaacctatattgtccgttacatacaattgtatagtttatcaa
gaacaagttatgcaaatagttagagatttggcaggatactctatgggacgtagtgacttg
gtaagacgtgccatgtctaagaaaaaacatgatgtaatggaacaggaaagaagaaatttt
atatatggtaatgaagatcaaggtgtaaaaggatgtataaataatggtatagatgaaaat
gtagctaatagtttatttgattctatgatggatttcgcttcctatgcatttaacaaatcc
cacgcagcagcttatgcagtagtaggttttcagacagcttatttgattagatattatccc
acagagtttattgcagctatgctaaatagtgtaaagggtgataatgataaggtatctttt
tatgttaattttgcaaaaactttaggaatagaaataatagctcctaatataaatgaaagt
tatagtaattttacagtaaaagataatagaataatatttggattaactgcagtaaaaaat
gtgggagaaaagggtatagataatatagttttatctagagaacaaaaggacaaatttata
gatttaagtgattttttcaataaagtagatacctcaattataaataaaaggttagtagaa
agtttaataaaagcaggagcctttgattgtttaaaggtatatcgttctaaaatgttagct
gtttttgaaaaaataatggatggtatacaaaagcagaaaagaaataatatagaaggtcag
gttaatttatttatggatattatggataacaaagaaagtagtatagatataaaatatcct
aatataaaggagtttgacaaaaaatatatacttcaaatggaaaaagaaatgacaggattg
tatttttccggtcatccattggaagaatatgaagaaacattaaaaattcaaacaagtcat
cttatatcagatattattcctaaggaatctttagaaggaaacttggtagatactataagc
agtataaaagacggagataaagtagtagtaggtggtatgattactcacgtaagtaagaaa
ttaactagaaataatgatatgatggcatttatagtattagaagatctatattccagtata
gaagttatagtattccctaaaatttttaatatggctagaaacataataaatgaagatgaa
gtagtcttattaaaaggaagagtaagtttaagagaggatgaacaaccaaagttaatttgt
gaatttatggagcctcttgtaaaaattaattctgaaaaattatatatattagtagaagaa
aaaaaggatataaaactaaagttacaagaaataaagggtgtatttttgcaacataaaggt
aatatacctgtatacttttgtacaaataaagaaagaaaaaagtttagaattgatagagaa
ctttgggtaaatggaagcagggaattaatggataacttgagaaatatgtttggagaagat
aatgtaaaaatactttaa
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