Clostridium botulinum A ATCC 3502: CBO3516
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Entry
CBO3516 CDS
T00533
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
cbo
Clostridium botulinum A ATCC 3502
Pathway
cbo00470
D-Amino acid metabolism
cbo00550
Peptidoglycan biosynthesis
cbo01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cbo00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CBO3516 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CBO3516 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cbo01011
]
CBO3516 (murD)
Enzymes [BR:
cbo01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CBO3516 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
cbo01011
]
Precursor biosynthesis
Amino acid ligase
CBO3516 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
AlaDh_PNT_C
DUF6506
CbiA
DTP-pb9_B-dom
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
CAL85077
UniProt:
A5I7P2
LinkDB
All DBs
Position
complement(3756820..3758196)
Genome browser
AA seq
458 aa
AA seq
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MKSNFSKFKDFIKYKKVAVVGIGVSNRPLIKFLVKLGAKVTAFDKKHREKLGSISLELEE
IGVDLVLGENYLDKLDGYDVIFKTPSMRIDRPEFVKAKESGAYITSEMEEFIKYCPAKVF
GITGSDGKTTTTTLVYEMLKKEGYRTWVGGNIGTPLFANIEEMKEDHMVVLELSSFQLMT
MDVSPEISLITNLSPNHLDVHKDFEEYVWAKKNIFKYQSSNNLLVLNKDDDLTNGMENEA
LGDVLKFSLVEKVYNGACLSNNKLTIQGKEVCDSKDIKLKGRHNIANLLAAFCMVNKYVS
IDSMKYVATNFSGVEHRCEFIREVNGIKYYNDSIASSPSRTLAGLNSFEKPVILIAGGYD
KKIPFEPLAEGGYDKIKILILMGDTKNKIKSAFEKVISYKKCEMEIVIVNSMEEAVKVAD
NMAEKGDIITLSPACASFDMYPNFEIRGNEFKNIVNSL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagcaatttttctaagtttaaggattttataaagtataaaaaagtagcagtggta
ggtataggggtaagcaatagacctttaataaaatttttagttaagttaggtgcaaaagta
actgcttttgacaaaaaacatagagaaaaattaggaagtataagtcttgaattagaagag
ataggtgtagatttagtattaggtgaaaattatttagataaattagatggatatgatgtt
atttttaaaactccatctatgagaatagatagaccggaatttgttaaggcaaaagaatct
ggagcttatattacatcagaaatggaagagtttataaaatattgtccagctaaagttttt
ggtataacaggaagtgatggtaaaacaactactacaacattagtgtatgaaatgttaaaa
aaagaaggctatagaacttgggtagggggaaatataggaacacctttatttgctaatatt
gaagaaatgaaggaagaccatatggttgtattagaactatcaagttttcagcttatgaca
atggatgtatcaccagagatttctttaatcactaatttaagtcctaatcatttagatgtg
cataaagattttgaggaatatgtatgggctaaaaaaaatatatttaagtatcaatcaagt
aataacttgttagtattaaataaagatgatgatttaacaaatgggatggagaatgaagct
ttaggagatgttttaaagtttagtcttgtagaaaaagtatataatggggcttgcttatca
aataataagcttactatacaaggaaaagaagtatgtgattctaaagatataaagcttaag
ggtaggcataatatagctaatttattagcagctttttgtatggtaaataaatatgtatca
atagatagtatgaaatatgtagctacaaatttttcaggtgtagaacatagatgcgaattt
ataagagaagttaatgggattaaatactataatgattcaatagcatcaagccctagtaga
actttagcaggattaaattcttttgaaaagccagtaatattaatagctggtggatatgat
aaaaagataccttttgaacccttggcagaaggtggatatgataaaattaaaatattgata
ttaatgggggatacgaaaaataaaataaaatcagcttttgaaaaagtaatctcctataaa
aaatgtgagatggaaatagttatagtaaatagcatggaggaagctgtgaaagtagctgat
aatatggcagaaaagggagatataataactttatcaccagcttgtgctagctttgatatg
tatcctaactttgaaataaggggaaatgaatttaagaatatagtaaatagtttataa
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