Enterocloster bolteae: CGC65_06170
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Entry
CGC65_06170 CDS
T05466
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
cbol
Enterocloster bolteae
Pathway
cbol03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cbol00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CGC65_06170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbol03019
]
CGC65_06170
Messenger RNA biogenesis [BR:
cbol03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CGC65_06170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_6
Lactamase_B_3
Tle3
SIS_2
DUF1529
DUF7692
Catalase_C
Motif
Other DBs
NCBI-ProteinID:
ASN98727
UniProt:
A0A414B0N7
LinkDB
All DBs
Position
1323144..1324784
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AA seq
546 aa
AA seq
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MKIIPLGGLEQIGMNITAFEYEDSIIVVDCGLAFPGDDMLGIDLVIPDVTYLKQNIDKVK
GFVITHGHEDHIGALPYILQQVNVPVYGTKLTIALIEHKLEEHRLLKNTKRKVMKHGQSV
NLGCFRVEFVKTNHSIQDASALAIFTPVGTVLHTGDFKIDYTPVFGDPIDLQRFAELGKK
GVLALMADSTNAIRPGFTMSERTVGKTFDAIFAEHQNRRIIVATFASNVDRVQQVVNTAY
KYGRKVVVEGRSMVTIMDIASKLGYINVPEGTLIDIEHLRNYPPESTVLITTGSQGESMA
ALSRMAASIHKKVSIVPGDVVVLSSTPIPGNEKAVANVVNELSMKGAEVICQDTHVSGHA
CQEDLKLIYSLVHPKFSIPIHGEYRHRMAQRELAQFMGVQKENAVMVNSGDVVALDEDSC
EVIDHVTCGGIFVDGLGVGDVGNIVLRDRQNLAQNGIIVVVLTLEKHSNQLLAGPDIVSR
GFVYVRESEDLLEEAHTIVYDAVQDCLDRHVSDWGKIKNIIKDSLSDFLWKRMKRNPMIL
PIIMEV
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
ctgaaaatcattccattaggcggtcttgagcagattggaatgaacatcaccgcctttgag
tatgaggacagcatcattgtggtggactgcggactggccttcccgggggacgacatgctg
ggcattgacctggttataccggacgtgacctacttaaagcagaacattgacaaggtgaag
ggcttcgtcatcacccatggccatgaggaccatatcggcgccctgccttatatcctgcag
caggtcaatgtgcctgtatacggcacaaagctgaccattgccctgattgagcataagctg
gaggagcaccgcctcttaaagaacaccaagcgcaaggtgatgaagcacggacagtccgtg
aacctgggatgcttcagagtggaattcgtgaagacaaaccacagcatccaggacgcatcc
gccctggccatatttacaccggtgggaaccgtgctgcacacaggagactttaagattgac
tacacgccggtgtttggggatcccattgacctgcagcgctttgcggagctgggcaagaag
ggcgtgctggccctgatggcagacagtaccaatgccatccgtcccggattcaccatgtcc
gagcgtacggtgggaaagacatttgacgccatattcgcggagcaccagaacaggcgcatc
atcgtggccacctttgcctccaatgtggaccgggttcagcaggtggtgaacacggcatac
aaatacgggcgcaaggtggtggtggaaggccgcagcatggtgactatcatggatattgcc
agcaagctggggtatatcaatgtgccggagggaaccctcatcgacattgaacacctgagg
aactacccgccggagtccacggtgctcattaccacgggaagccagggcgagtccatggcc
gccctttccaggatggctgccagcatccataagaaggtatccattgtgccgggagatgtg
gtggtgctgagctccacgccgattcctggaaatgaaaaggcagtggccaatgtggtgaac
gagctgtccatgaagggcgctgaggtaatctgccaggatacccacgtatcaggacatgcc
tgccaggaggatctgaagctgatttattccctggtgcatccaaagttctccatccccatc
catggcgagtaccgccaccgtatggcccagagggaactggcccagtttatgggtgtacaa
aaggaaaatgctgtcatggtcaactccggcgacgtggtggccctggacgaggacagctgc
gaggtgatagaccacgttacctgcggaggcatcttcgtggacggcctcggcgtgggcgat
gtgggcaatattgtattacgggatagacaaaaccttgcacaaaatggtattattgtagta
gtattgacgttagagaagcacagcaaccagctgcttgcgggaccggatattgtgtccaga
ggctttgtgtatgtgcgggaatccgaggatttgctggaggaggcccacaccattgtgtac
gacgcagtgcaggactgcctggaccgccatgtcagcgactggggtaagataaagaacatc
attaaagacagtttaagtgactttttgtggaagcgcatgaagcgcaatcccatgattctg
ccaattatcatggaggtataa
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