KEGG   Calonectris borealis (Cory's shearwater): 142073592
Entry
142073592         CDS       T11211                                 
Symbol
RAB5B
Name
(RefSeq) ras-related protein Rab-5B
  KO
K07888  Ras-related protein Rab-5B
Organism
cbor  Calonectris borealis (Cory's shearwater)
Pathway
cbor04137  Mitophagy - animal
cbor04144  Endocytosis
cbor04145  Phagosome
cbor04148  Efferocytosis
cbor05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cbor00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    142073592 (RAB5B)
   04145 Phagosome
    142073592 (RAB5B)
   04137 Mitophagy - animal
    142073592 (RAB5B)
   04148 Efferocytosis
    142073592 (RAB5B)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    142073592 (RAB5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cbor04131]
    142073592 (RAB5B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cbor04147]
    142073592 (RAB5B)
   04031 GTP-binding proteins [BR:cbor04031]
    142073592 (RAB5B)
Membrane trafficking [BR:cbor04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    142073592 (RAB5B)
 Endosome - Lysosome transport
    142073592 (RAB5B)
Exosome [BR:cbor04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   142073592 (RAB5B)
  Exosomal proteins of other body fluids (saliva and urine)
   142073592 (RAB5B)
  Exosomal proteins of colorectal cancer cells
   142073592 (RAB5B)
  Exosomal proteins of melanoma cells
   142073592 (RAB5B)
GTP-binding proteins [BR:cbor04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    142073592 (RAB5B)
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA RsgA_GTPase AAA_16
Other DBs
NCBI-GeneID: 142073592
NCBI-ProteinID: XP_074989659
LinkDB
Position
30:complement(609552..613601)
AA seq 215 aa
MTSRGAARPNGQSQASKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQR
QASPSIVIALAGNKADLASKRMVEYEEAQAYADDNSLLFMETSAKTAMNVNDLFLAIAKK
LPKSEPQSTSGAAGRSRGVDLHEQSQQNKSQCCSN
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaccagccgaggagccgccaggccgaacgggcagtcccaagccagtaaaatctgtcag
ttcaaactggtgctgctgggcgagtcggcggtggggaaatccagcctggtgctgcgcttc
gtcaagggccagttccacgagtaccaggagagcaccatcggcgcggcgttccttacacag
tccgtctgcctggatgacacaacggtaaagtttgagatctgggatacggccggccaggag
agataccacagtctggcccccatgtactaccggggggcacaagccgccatcgtggtctat
gatatcaccaaccaggaaacgtttgcgcgggcgaagacatgggtgaaggagctgcagaga
caagccagccccagcatcgtgatcgccctcgcgggcaacaaggctgacctggccagcaaa
cgcatggtggaatacgaagaggcgcaggcctacgcagatgacaacagcctattgttcatg
gagacgtcggccaagacggcgatgaatgtgaacgacctcttcttggccattgccaagaag
ctgccaaagagcgagccccagagcacgagcggagcggcgggccggagcagaggcgtggac
ctgcacgagcagagccagcagaacaagagccagtgttgtagcaactaa

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