Calonectris borealis (Cory's shearwater): 142073648
Help
Entry
142073648 CDS
T11211
Symbol
GLI1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
142073648 (GLI1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142073648 (GLI1)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
142073648 (GLI1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
DUF7565
Motif
Other DBs
NCBI-GeneID:
142073648
NCBI-ProteinID:
XP_074989750
LinkDB
All DBs
Position
30:complement(35372..43902)
Genome browser
AA seq
1303 aa
AA seq
DB search
MFNPASPPATGYVEHCCLRPPHGPAPGAPGPQGFDFPLCHQSNLMSSHRGYGLVPGTEHP
GNGDGSRFSTPRGAGKLGKKRALSISPLSDSSIDLQTVIRTSPNSLVAFINSRCASASGS
YGHLSISTISPSLGYQSPPGQQKGQGHLYSHTPPPPPCSSHEHLSTRPGLLHHAPARGTL
KHCQQLKLEWSLSSPLTVKYPEERSEGNISSPASTGTQDPLLGMLDVREDLEKEDGKPES
ETVYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSREQRPFKAQYMLV
VHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRA
KHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPDAHVTKKHRGDVVPGRALPT
PSGPPDMKQEKDTNGPGEARKDDGKLLVPDLALKPQPSPGGQSSCSSDHSPLGSTTNNDS
GVEMAGNAGGSYEDLSTLEDVVSSEPMGTSGLMALHKLENLRIDKLKQMRKPSATKGLNF
PAIPGAGPPGEVPGISVPPPAASHRRIAELSAAEMGMPLNERRSSATSTVSSAYTVSRRS
SLVSPYLAGPCLGGEAGAMPGGAGPADGYDPISPDESRRSSDASHCGGLPGVGSLTPAQR
YRLKAKYAAATGGPPPTPLPNTERVGMGGHSSLPGDYLGPAETRFLANGLLRRHSSNDYP
GYAGSVPPHLVPRNGVRRASDPARTAANPHAVPKVHRFKSTGNVNVPGAGRTALQPLGGS
DANLQRHIFSPRPPSISENVFLESVSVEGPDPGTEAGLLEMEQYLNYPEESFPCQGTGVE
LQCESLYASTHRTTVGMQLNPGGHRDMDEGLLQSEFSLPQCQMNQHFMTMHSGNRTMPAP
WDEPPQGNPEMSSGQSSVSASAAAMSGQHCHHQSTDYPLPSSCGQQPKLVSSCQDSGFSG
GHRLNRLQIKSEQRYPALAPALAPCRNAKLAGPMQPPASFGQAMNVGPGGYQSEEQAPVS
YMGMLSLGARRAQTPTMQTKEVMVRSYVQAQQALMWGDQLASKGGEAGMGLGSEPGQCQA
MQAPLYLSPKYSGYQAKPDHLQGLAETQHLLNATCFNPEMVPHPPGGPKPPGHQNNLNYA
GSLAQPSHSYEGVEASSRRVLRLPPARPTPEGPSNALLYYPGQGTHVQVGKGGHKLLGQT
AASCGGPGHYGGSLEGLKGSSYYYLDSGEQMANSLDSLDLENTHLDFAAIVEDPETPALL
PGPPSPAGGLLLPASGGANMAVGDMSSMLSTLAGESHFLNSLS
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaccctgccagccccccggccaccggctacgttgagcactgctgcctgcgcccg
ccccacggaccagcccctggtgctccagggccacaaggatttgatttccccttatgccat
cagtcaaacctcatgagcagtcaccgtgggtatgggttggtgccaggaaccgagcacccg
ggcaatggtgatggctcacggttctcaacgccccgtggtgcaggcaaactgggcaagaag
cgggctctgtccatctcacccctgtcagactctagcattgacctgcagacggtaatccgc
acctcacccaactccctcgttgcgttcatcaactcccgctgcgcctctgccagtggctcc
tatggccacctctccatcagcaccatcagtccatcactggggtaccagagtccaccaggt
cagcagaagggccaaggccacctgtacagccacacccccccacccccgccatgtagctcc
catgaacacctgtccacccgcccagggctcctgcaccatgccccagctcgtgggaccctc
aaacactgccagcagctaaagttggagtggagcctgagcagccctctgactgtcaaatac
ccagaggagagatccgaaggcaacatctccagtccagcttccacaggcactcaggacccc
ttgctggggatgctcgatgttagggaagatctggagaaagaggatgggaaacctgagtct
gagaccgtgtatgaaaccaattgctactgggatggctgtgccaaggagttcgatacgcag
gagcagctggtgcaccatatcaacaatgagcatatccacggggagaagaaggagtttgtg
tgccactgggcagcatgttcccgagagcagaggcccttcaaggctcagtacatgttggtg
gtgcatatgcgacgtcacacaggcgagaaacctcacaaatgcacgttcgagggctgtaac
aaagcctactcacgtctggagaacctcaagacccatctgcgctcacacacgggtgaaaaa
ccctacgtgtgtgaacacgaaggctgcaacaaggccttctccaatgcttctgaccgggcc
aagcatcaaaaccgcactcactccaatgagaagccctatgtgtgcaagattccaggctgc
accaagcgctacacagaccccagttccctgcgcaaacatgtgaagacggtgcatggccct
gacgcccacgtcaccaagaagcaccgaggggatgtggtgccaggccgtgcactgcccacc
cccagtggccccccagacatgaagcaggagaaagacacaaatggccccggtgaggcccgg
aaggatgacggcaagctcttggtgcctgacttggccttgaagccgcagcccagcccaggt
gggcagtcgtcgtgcagcagtgaccactctccactcggcagcaccaccaacaatgacagc
ggagtggagatggcgggcaacgcaggtgggagctacgaggatctgtccacactggaggat
gtggtgtccagtgagcccatgggcacttcagggctcatggccctccacaagctagaaaat
cttcgcattgacaaactgaagcagatgaggaagccatcagctaccaagggcctgaatttc
ccagccatccctggagccggcccgcctggggaggtgcctgggatttccgtgccaccgcca
gctgcttcgcaccggcgcatcgcagagctgtcagcagcagagatgggcatgccactgaac
gagcgccggagcagcgccaccagtaccgtaagctcagcctacaccgtgagccggcgctca
tccctagtgtccccgtatctggctgggccatgtctgggtggcgaggcaggggcaatgccc
ggcggggcaggcccagcagatggctatgaccccatctctccggacgagtcacgacgctcc
agtgatgccagccactgtggagggctgccaggcgtgggcagccttaccccggcccagcgc
taccgtctcaaggccaaatatgctgcagccacaggtggcccacccccaaccccactgccc
aacacggagcgggtgggcatgggtggccacagcagcttacctggggactaccttgggcca
gctgaaacccgcttccttgcaaatggtttgctgcgaaggcacagttccaatgactaccct
ggctatgcaggcagcgttccccctcacctggtgcctcggaatggtgtgcggcgggccagc
gaccctgctcggaccgcggccaaccctcacgctgtgcccaaggtgcatcgttttaagagc
acgggtaacgtgaatgtgccaggagcgggcagaacggctctgcagcccttgggtggctct
gatgccaaccttcagcgccatatcttctccccacgcccacccagcatcagtgaaaatgtc
ttcctggagagtgtgagcgtagagggccctgacccaggaacggaggctggcttgctggag
atggaacagtacttgaactaccccgaggaaagcttcccatgccaggggacaggtgtggag
ctccagtgtgaaagcctctacgccagcactcaccggaccacggtgggtatgcagctgaac
ccaggagggcacagggacatggacgaggggttgcttcagtccgagttctccctccctcag
tgccagatgaaccagcacttcatgactatgcattctggcaacaggaccatgccagctcct
tgggacgaacctccccaaggcaatccggagatgagttctgggcagtcaagtgtcagtgcc
tctgctgctgccatgtctgggcaacactgtcaccaccaaagtactgattacccactaccc
agttcttgtgggcagcaacccaagcttgtgagctcgtgccaggacagtggattttctggg
gggcaccggcttaatcgactacagatcaaatctgagcagcgttacccagcacttgcccca
gcacttgctccctgccggaacgccaagcttgctgggcccatgcagcctcctgcatcgttt
ggccaagccatgaatgtagggcctggtggttaccagtctgaggaacaggcacctgtcagt
tacatgggcatgttgagcctgggcgctagaagagcccagacccccaccatgcagaccaaa
gaagtgatggtccgtagctatgtgcaggcccagcaggctctgatgtggggagaccaacta
gcctccaagggaggggaggctggcatggggctgggcagcgaacctgggcagtgccaagcc
atgcaagcaccactgtacctcagtcccaagtactctggttaccaagccaaaccagatcac
ctgcagggtctggcagagacccaacacctcctaaatgccacatgcttcaacccagagatg
gtgccacacccacctggtggccctaaaccacctggtcaccaaaacaatctgaactatgcg
ggcagcctggctcagccaagtcattcctacgagggagtggaagccagctcccggcgtgta
cttcgcttgccccctgcccgccccacacctgaggggcccagtaatgccctgctgtattac
ccaggccagggcacacatgtgcaggtgggcaaaggtgggcataagctgctgggccaaacg
gcagcaagctgtgggggtcccgggcattatggtgggagcttggaaggactcaaaggcagc
tcatattactacctggattcaggggagcagatggccaacagcctggactccctggatctg
gagaatacgcaccttgacttcgctgccattgtggaagatccagagacaccagcactgctg
cctgggcccccaagccctgctggtggcctcctgcttcctgcatctggtggtgccaacatg
gccgtgggtgacatgagctccatgttgagcactctggcaggggagagccatttcctcaac
tccctgtcctaa
DBGET
integrated database retrieval system
