Calonectris borealis (Cory's shearwater): 142073662
Help
Entry
142073662 CDS
T11211
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
142073662 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cbor03021
]
142073662 (SMARCC2)
03036 Chromosome and associated proteins [BR:
cbor03036
]
142073662 (SMARCC2)
Transcription machinery [BR:
cbor03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
142073662 (SMARCC2)
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
142073662 (SMARCC2)
PBAF complex
142073662 (SMARCC2)
GBAF(ncBAF) complex
142073662 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
142073662
NCBI-ProteinID:
XP_074989780
LinkDB
All DBs
Position
30:515302..527482
Genome browser
AA seq
1203 aa
AA seq
DB search
MAVRKKDGGPNVKYYEASDTVSQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGALCHILAAAYKFKSDQGWRRFDFQNPSRMDRN
VEMFMTIEKSLVQNNCLARPNIFLHQEIEPKLLSKLKDIVKRHQGTVTEDKSNASHIVCP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVTDEKSPVARRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYNKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETAGKDEEENGTGSKGEQAKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQSDGDAKTGRKSKEIEDLVTETVKGKPELQTSASQQMLNFPDKSKEKP
ADMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTASDEPE
RIEESGAEEARAEAQPAEEKKEAKEPRDGAAEEEAKEKPGEAPKKEEEKGKEAEGEKEPD
KGDGDGAGEPEKEKEAKEGPDEAPKEPPEPEAERKAKVERDIGEGNLSTAAAAALAAAAV
KAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLADR
QAFHMEQLKYAEMRARQQHFQHLQQQQQQQPPPLPPGAQPLPAAAGAPLAPAAHPLGAPP
APAMVAPAEPVGQPLPGAPPPQPPPPPGAPAIPHAPAPFPGQQPPSQSLAGSLGGSGHPA
VPGNAPAALPFGLPPSAIPFSMANPPAEPLGATFPANPPALPLHGALASSMPSGGLPPPP
HPPGLALPHLAGGSAAAHSPAIVAAVQGSLLPNPGLLADQGPPLQTDPIAPSPSTATPVP
PTQ
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtcaagtactacgaggcctcggacacc
gtcagccagttcgacaacgtccgcctctggctcggcaagaactacaaaaagtacatccag
gccgagccccccaccaacaagtcgctgtcgagcctggtggtgcagctgctgcagttccag
gaggaggtcttcggcaagcacgtcagcaacgcgcccctcaccaagctgccgataaaatgc
ttcttggatttcaaggcgggaggagccctgtgccacatcctggcagcggcctataaattc
aagagcgaccaaggatggcggcgtttcgatttccagaatccctcgcggatggaccgcaac
gtggagatgttcatgaccatcgagaaatccctggtgcagaacaactgcctggcccggccc
aacatcttcctgcaccaggagatcgagcccaagctgctgagcaagctgaaagacatcgtc
aagaggcaccagggcacagtgaccgaggacaagagcaacgcgtcccacatcgtctgccct
gtccccgggaacctggaggaagaggagtgggtccggccggtcatgaagcgcgacaagcag
gtcctgctgcactggggctactaccccgacagctatgacacctggatccccgccagcgag
atagaggcctccgtggaggacgccccgacgccggagaagccccggaaggtccacgccaag
tggatcctggacacagacaccttcaacgagtggatgaacgaggaggactacgaggtgacg
gacgagaagagccctgtcgcccgcaggaagaagatctcggccaagacgctgacagacgag
gtgaacagccccgactcggaccggcgggacaagaaggggggcaactacaagaagcgaaag
cgctcgccctccccctcgcccaccccagaggccaagaagaaaaacgcgaagaagggaccc
tccaccccctataacaaatccaagcgcgggcaccgcgaggaggagcaggaggacctgacg
aaggacatggacgagccctcgcccgtccccaacgtggaggaggtcaccctgcccaagaca
gtcaacaccaagaaggactcggagtctgcgcccgtcaaggggggcaccatgacggacctg
gatgagcaggaggatgagagcatggagacggccggcaaggacgaggaggagaacggcacc
gggagcaagggggagcaggccaagaaccccgacctgcacgaggacaacgtgacggagcag
acccaccacatcatcatccccagctacgccgcctggttcgactacaacagcgtccacgcc
atcgagcgccgagccctgcccgagttcttcaacggcaagaataaatccaagacccccgaa
atatacttggcttaccgcaacttcatgatcgacacgtaccggctgaacccgcaggagtac
ctgacctccacggcgtgccgccgcaacctggccggggacgtctgcgccatcatgcgggtc
cacgccttcctggagcagtggggcctcatcaactaccaggtggacgccgagagccggccc
acccccatgggccccccgccgacctcccacttccacgtcctggccgatacgccctcgggg
ctggtgccgctgcagcccaagacgccccagggccggcagagcgacggcgacgccaagacg
ggccgcaagagcaaagagatcgaagacctcgtcaccgagacggtgaaggggaagccggag
ctgcagacctcggcctcgcagcagatgctgaacttccccgacaagagcaaggagaagccg
gccgacatgcagaacttcggcctccgcaccgacatgtacaccaagaagaacgtcccctcc
aagagcaaagccgccgccagcgccacgcgggagtggacggagcaggagacgctgctgctg
ctggaggccctggagatgtacaaggacgactggaacaaggtgtcggagcacgtgggcagc
cggacgcaggacgagtgcatcctgcacttcctgcggctgcccatcgaggacccctacctg
gaggactcggaggcgtccctggggccgctggcctaccagcccatccccttcagccagtcc
ggcaaccccgtcatgagcaccgtcgccttcctggcctccgtcgtcgacccccgcgtcgcc
tccgccgccgccaagtcggctctggaggagttctccaagatgaaggaggaggtgcccacg
gccttggtggaggcccacgtccgcaaggtggaggaggcggccaaggtgacgggcaaggcc
gaccccgcgttcgggctggagagcagcggcatcgccggcaccgcctcggacgagccggag
cggatagaggagagcggcgcggaggaggcgcgggcggaggcgcagccggcggaggagaag
aaggaggcgaaggagccccgggatggcgccgccgaggaggaggcgaaggagaagcccggg
gaggcacccaagaaggaggaggagaaggggaaggaggcagagggcgagaaggagcccgac
aagggtgatggcgatggcgcaggggagccggagaaggagaaagaggcgaaggaggggccg
gacgaggcgcccaaggagccaccggagcccgaggccgagcgcaaggccaaggtggagcgg
gacatcggcgaggggaacctctccaccgccgccgccgccgccctggctgccgccgccgtg
aaggccaagcacttggcggcagtggaggagcgtaagatcaagtcgctggtggcgctgctg
gtggagacgcagatgaagaagctggagatcaagctgcggcacttcgaggagctggagacc
atcatggaccgggagcgcgaggccctggagtaccagcggcagcagctgctggcggaccgc
caggccttccacatggagcagctgaagtacgcggagatgcgcgcccgccagcagcacttc
cagcacctccagcagcagcagcagcagcagccgcccccgctgccgccgggggcccagccc
ctgcccgccgccgccggcgcccccctggcccccgccgcccacccgctgggcgcgccgccc
gcccccgccatggtggcccccgccgagcccgtggggcagccgctgcccggggcccccccg
ccgcagccgcccccgccgccgggcgccccggccatcccgcacgccccggcgccattcccc
gggcagcagccgccatcccagagcctggctgggagcctcggtggcagcggccaccccgcc
gtgcccggtaatgcgcccgcggccctgcccttcggattgcctccatccgccatcccattt
agcatggctaacccccccgccgagcccctcggcgccaccttccccgctaacccgcccgcc
ctcccgctgcatggggccctcgccagcagcatgccgtccggggggctgcccccccccccc
cacccacccggcctggccctgccgcacctcgcggggggctcggccgccgcgcacagcccc
gccatcgtggccgccgtgcagggaagcctccttcccaaccccggcctcctcgcagaccaa
ggcccccccctgcagacggaccccatcgcgcccagccccagcacggccacccccgtcccc
cccacgcagtga
DBGET
integrated database retrieval system
