Calonectris borealis (Cory's shearwater): 142073828
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Entry
142073828 CDS
T11211
Symbol
SHMT2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial isoform X1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor00260
Glycine, serine and threonine metabolism
cbor00630
Glyoxylate and dicarboxylate metabolism
cbor00670
One carbon pool by folate
cbor01100
Metabolic pathways
cbor01200
Carbon metabolism
cbor01230
Biosynthesis of amino acids
cbor01240
Biosynthesis of cofactors
cbor04981
Folate transport and metabolism
Module
cbor_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
142073828 (SHMT2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
142073828 (SHMT2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
142073828 (SHMT2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
142073828 (SHMT2)
Enzymes [BR:
cbor01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
142073828 (SHMT2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Coat_F
Motif
Other DBs
NCBI-GeneID:
142073828
NCBI-ProteinID:
XP_074990149
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Position
30:complement(162030..166684)
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AA seq
501 aa
AA seq
DB search
MWPLRLGRALQRCGGQVATGSQRAQHGTAAAAATRHMPSWTGQESLAESDPEIWTLVQKE
KDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDQIELLCEQRA
LEAFDLDPARWGVNVQPYSGSPANFAAYTALLQPHDRLMGLDLPDGGHLTHGYMSDIKRI
SATSIFFESMPYKLDPATGLIDYDQLEVTARLFRPRLIIAGTSAYARLIDYARMKKVCEE
VKAYLLADMAHISGLVAAKAIPSPFEHADLVTSTTHKTLRGARSGLIFYRKGVRSVDKKT
GKEMLYDLEDRVNFAVFPSLQGGPHNHAIAAVAVALKQASSPAFRQYCQQVLKNAKAMAQ
ALLQRGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRHFREEDFQKVVAFIDEGIALALDVKSKTSKLQDFKTFLLQDAETQHRLA
ELRQRVETFARAFPMPGFSDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgtggccgctccgcctgggcagggccctgcagcgatgtggtggccaggtggccactggc
agccagcgggcgcagcacggcaccgctgcggcagctgccaccaggcatatgcccagctgg
acggggcaggagagtctggccgagagcgaccccgagatatggaccctggtccagaaggag
aaggatcggcagtgccgggggctggagctcatcgcctctgagaatttctgcagccgggca
gcactggaagccctgggctcctgcctcaacaacaagtactcagaggggtaccctggcaag
aggtactacgggggagccgaggtggtggaccagatcgagttgctgtgcgagcagcgggct
ctggaggcgttcgacctggatcctgcccgctggggtgtcaatgttcagccgtactcaggg
tctccagccaacttcgcagcctacacagccctgctgcagccccacgaccgcctgatgggg
ctggacctgcccgatgggggccacctcacacacgggtacatgtcggacatcaagagaatc
tcagcaacatccatcttcttcgagtcaatgccctacaaacttgatccagccacagggctg
attgactatgaccagctggaggtgacggcgcggctcttccgccctcgtctcatcatcgcc
ggcaccagtgcgtacgcccgcctcatcgactacgctcgcatgaagaaggtgtgcgaggag
gtgaaggcgtacctgctggcggacatggcgcacatcagcgggctcgtggcagccaaggcc
atcccttcgcccttcgagcacgcggacctggtcaccagcaccacgcacaagaccctgcgt
ggcgccaggtcaggactgatcttctaccgcaagggtgtgcgctcggtggataagaagacg
ggcaaggagatgctctacgacctggaggacagggtcaattttgctgtcttcccctccctg
caaggggggccccacaaccacgccatcgctgccgtggccgtggccctcaaacaggccagc
tcgccagctttccgccagtactgccagcaggtgctgaagaacgccaaagccatggcgcag
gccctgctccagcgtgggtacaccctggtgtcaggtggcaccgacaaccacctggtcctg
gtggacctgcggcccaagggcatcgacggcgcgcgggctgagcgggtgctggagctcgtc
tccatcactgccaacaagaacacgtgcccaggggacaagagcgcgctcacgccagggggg
ctgcgcctgggtgcccccgcgctgacctcccgccacttccgcgaggaggatttccagaaa
gtcgtagctttcattgacgagggcatcgcgctggccctggacgtcaagagcaaaaccagc
aagctccaggatttcaagaccttcttgctgcaggacgcagagacgcagcatcgcttggct
gagctgcgccagcgcgtggagacctttgctcgtgccttccccatgcccggcttcagtgac
cactga
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