Calonectris borealis (Cory's shearwater): 142073987
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Entry
142073987 CDS
T11211
Symbol
SPTBN4
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04517
IgSF CAM signaling
cbor04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142073987 (SPTBN4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
142073987 (SPTBN4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142073987 (SPTBN4)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
142073987 (SPTBN4)
Intermediate filaments
Intermediate filament-binding proteins
142073987 (SPTBN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
CH_2
PH_11
DUF7971
Motif
Other DBs
NCBI-GeneID:
142073987
NCBI-ProteinID:
XP_074990434
LinkDB
All DBs
Position
32:complement(281886..304402)
Genome browser
AA seq
2458 aa
AA seq
DB search
MAAVAAELDNMEQQNNNSPWEGPDPRGWDDTTATAKLFECSRIKALADERDAVQKKTFTK
WVNSHLARVSCRIGDLYADLRDGYVLTRLLEVLSGEQLPKPTRGRMRIHSLENVDKALQF
LKEQRVHLENVGSHDIVDGNHRLTLGLIWTIILRFQIQVIKIKTEDNRETRSAKDALLLW
CQMKTAGYPEVNIQNFTTSWRDGLAFNALIHKHRPDLIDFHKLTKSNATYNLQQAFNTAE
QQLGLSKLLDPEDVNMEDPDEKSIITYVVSFYHYFSKMKALAVEGKRIGKVLDQAMEIEA
IIERYEALAAELLAWIQHTITIISNQKFANSLTGVQQQLQAFTAFCTLEKPVKFQEKGNL
EVLLFTIQSKLRANNRKLYVPSEGKTISDINKAWTCLEKAEHEREVSLRNELIRQEKLEL
LAQRFDHKAVMRETWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADISSYQERIQVVV
ELALEMESEGYYDTKRISAQKDNILRQWGLLTELVRARRARLEQNLALQKIFQEMVYMID
WMEEMQVLLVSKDLGKHLLEVEDLLQKHGLLEADISAQTERVQALNAAALKFSELEGYQP
CDPQIICNRVNHVQTCLEELGELAGKRRKELEDSRQLWAFFQEVEEAEAWIREKEQILAA
KTCGRDLSSVLTLTNKHKSMLGELGSRRALLHQTMKKGEQILAKKRFSPGGIQEKMREVR
LRWKKLEEVTGLHQQRLQEALNFFQFSAETDDLVAWLQDTYRIVSSDDFGHDDYSTQALL
RKHRAVVEEVEKHRAAVLALRKQLALLAPEHRQGVDVQIRVVEVEQLYGEVAEVAVLRQQ
WLQDALAVYRMFSEVHACEVWVDEKEQWLERMVVPEELDEVEVVQHRFESLDQEMNSVMG
RILDVNQVVQQLVDGGHPSSEEVRSCQDHLNSRWNRVVELVERKKGQLSSVLKIQNYLLE
CGEMKAQVREKRKAIEATQSGGGDLGGVLALQRRLSTMEAALVVLEPRLVELQREGEALA
ASHPGRALEILLPFEQISEEWEALKRALQGCEDSLTVAGRLQQFIQDLDNFLGWLVKTQA
AVASEEMPDNLTEAERLLNQHATLKEEINGYEEDYAKIQAASDLLALEETEVPYLSLQQW
LQKLDAGWGKLLQSWETRREMLVQSHVFHLFLRDVQQCETSLYNQESTLVHAELPDTVEG
VNNAIKKHKDFTTTMDLNLQKIQLALQAGESLQRQGNLYSDRVAEAMEGLRTKSHRNYQL
AQEWMQRLKDHLELQRFLQDCHELDGWIREKVLMAGDPSRDPPPRPPKPWLKHQAFMAEL
AQNKEWLEKIEKEGEELLLTKPELTGAVRRQLEELRQCWVELESTSQARSRRLAEAAAAE
RLARSYAEMEARLGRLEEQLETVGAGADLLSVSRQLKRLQTMESQVEEWYKEVGELQVQA
AALPAQAAGRQAVGERQSAVGTRIVRLIEPLKERRRILLASKEVHQVSHELEDEVLWVQD
RLPLATLKDHGTNLQTVQQFIKKNQNLRREIQVHRPRVDEVLERAGAVASIKSPEAEGVR
RLLERLGTMWGELQEQAERRQQTLDATYQLEQYYFDVAEVESWLGEQELLLMSEEKGKDE
QSTLQLLKKHLLTEQTVENYEETIAQLSRQCRALLELGHPQSEQVSRRQSQVDRLYVSLK
DLVEERKVKLEQQYWLYQLNREVDELEHWIAEKEVVAGSPELGQDFEHVTLLQEKFLEFA
SETGSVGQERIAAVNQMVDELIDYGHADAATIAEWKDGVNEAWADLLELMETRAQMLAAS
HELHKFFNDCKEILGQIEEKRQRLPELAAREGRTSAGALQRALGAFEHDVEVLVTQVRQL
QEGAAQLRTLYAGDNAEAIAGREQEVLRAWKELLAACEECRLHVASIADKIRFVGTVRDL
LAWMDGILCQIGAGEKPRDVSSVELLMNDHQGLKNEIEARAKSVAACLELGKTLILGKSP
AADEIKANVEKLLAKKKEMMEKWDKHWEWLQQMLEVHQFAQEAVVADAWLTAQEPLLKSQ
ELGSSVDEVEQLIRRHEAFRKAAAAWEERFSSLRRLTTIEKLKAEQNKQPPTPLLSRKFL
GEPPGGSTPSPGGSERPESRRLEPRVAYVRHELRPERLQPKLDRVQGPPEDGGPGGEPPP
PSTAGETPVPPKTDEPGEGRTGLLERRRERRERRLERQESSEPEPPRHDGKGGGKATLAD
IVEQLQEKEAGGPLPASPRERESPARLPTGPEGLPERTPRPDRPRARDRPKPRRRPRPKD
PAQGPGETRRSRSAPAQGSAPPPPPPPTHTVQHEGFLFRKHELDGPNKKASNRSWVNLYC
VLSKGDLGFYKDAKGQATGSTHGGEPLLNLHHSTSEVANDYKKKKNVFKLKTSDGSEFLL
QAKDEEDMRGWLRALAACAQEHVEVARWSQGLLTTSSTDEGLPRREGDRRPSTSGRRK
NT seq
7377 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggcggccgagctggacaacatggagcagcagaacaacaacagcccctgg
gagggccccgacccccgcgggtgggacgacaccacggccaccgccaaactcttcgagtgt
tcccgcatcaaagccttggccgatgagagggacgcggtgcagaagaagactttcaccaag
tgggtgaattcccacctcgcccgcgtctcctgtcgcatcggggatctctacgccgacctc
cgcgatggctacgtcctcacccggctgctggaggtgctctccggggagcagctgcccaaa
ccgacgcggggccggatgcggatccactcgttggagaacgtggacaaggcgttgcagttc
ctcaaggagcaacgggtgcacctggagaacgtgggctcccacgacatcgtggatggcaac
caccgcctcacccttggcctcatctggaccatcatcctccgcttccagatccaggtgatc
aaaatcaagaccgaagacaaccgggagacgcgctcggccaaggatgctctgctgctctgg
tgccagatgaagacggcgggctaccccgaggtgaacatccagaacttcaccaccagttgg
agggatgggttggccttcaacgctctcatccataagcacaggccggacctcatcgacttc
cacaagctgaccaagtccaacgcgacctacaaccttcaacaagccttcaacacggccgag
cagcagctggggctcagcaagctgctggaccccgaggacgtcaacatggaggaccccgat
gagaagtccatcatcacctacgtggtgtccttctaccactacttctccaagatgaaggcg
ttggctgtggaggggaagcgcatcgggaaggttctggatcaagccatggagattgaggcc
atcatcgagcggtacgaggcgctggcggccgagctgctggcctggatccagcacaccatc
accatcatcagcaaccagaagttcgccaactccctgaccggggtgcaacagcagctccaa
gccttcaccgccttctgcaccctggagaaacccgtcaagttccaggagaaggggaacctg
gaggtcttgctcttcaccatccagagcaagctacgggccaacaaccgcaaactctacgtc
cccagcgagggcaagaccatctctgacatcaataaggcctggacctgtctggagaaggca
gaacacgagcgggaggtgtcgctgcgcaacgagttgatccggcaggagaagctggagctt
ctggcccaacgttttgaccacaaggccgtcatgagggagacgtggctgaacgagaaccaa
cgcctggtctcgcaggacaactttggctacgacctgccggcggtggaggccgccatgaag
aagcacgaggccatcgaggccgacatctcctcctaccaagagcgcatccaagtggtggtg
gagctggccctggagatggagtccgagggctactacgacaccaagcgcatcagcgcccag
aaggacaatatccttcggcagtgggggctcttgaccgagctggtccgcgcccgccgtgcc
cgcctcgagcagaacctggccctgcagaagatcttccaggagatggtctacatgatcgac
tggatggaggagatgcaggtgctactggtctccaaggatttggggaaacatcttctggag
gttgaggatctcctgcagaagcatgggctgctggaggctgacatctccgcccagaccgaa
cgggtgcaggcgctcaacgccgccgcgctcaagttctcagagctggaaggctaccaaccc
tgcgacccccagatcatctgcaaccgggtcaaccacgtccagacgtgcctggaggaactg
ggggagctggcgggcaagagacgcaaggagctggaggactcccgccagctctgggccttc
ttccaggaggtggaggaggccgaagcgtggatccgtgagaaggagcagatcctggccgcc
aagacgtgcggccgggacctgagcagcgtcttgacgttgaccaacaagcacaagagcatg
ttgggtgagctggggagtcgacgggcgctgttgcaccagactatgaagaaaggcgagcag
atcttggccaagaaacgcttcagccccggtgggatccaggagaagatgcgggaggttcgc
ctccgctggaagaaactggaggaggtgacggggttgcaccaacagcggttgcaggaggcc
ctcaacttcttccagttcagcgccgagacggatgatttggtggcctggttgcaggacacc
taccgcatcgtctccagcgatgactttggtcacgatgactattccacccaagctcttcta
cggaagcaccgggcggtggtggaagaggtggagaagcaccgggctgccgtgttggccctt
cggaagcagttggctcttctggcacccgaacatcgtcaaggggtggacgtgcaaatccgg
gtggtggaggtggagcagctctacggggaggtggccgaggtggccgtgctgcggcagcag
tggttgcaggacgccttggccgtctaccgtatgttcagcgaggtgcacgcctgcgaggtc
tgggtggacgagaaggaacagtggttggagaggatggtggtgccggaggagctggatgag
gttgaggtggtccagcataggtttgaaagcttggaccaggagatgaacagcgtcatggga
cggatcttggatgtcaaccaggtggtgcaacagttggtggacgggggccaccccagctcg
gaggaggtccgctcctgccaggaccacctcaacagcaggtggaatcgggtggtggaactg
gtggagcgcaagaagggtcaactcagttccgtcctgaagatccaaaactacctgctggag
tgcggcgagatgaaggcgcaggtgcgggagaagagaaaagccatcgaagccacccagtcc
ggtggcggcgacctgggcggcgtgttggccttacaacgtcgcctctccaccatggaggcg
gctttggtggtcttggaacctcggttggtggagcttcaaagagaaggtgaagccttggct
gcctcccaccctggaagagccctggagatcttgctgcccttcgagcagatcagcgaagag
tgggaagccctgaaacgggcgctgcaaggttgcgaagattccttgaccgtcgctggtcgc
ttgcaacaattcatccaagacttggacaacttcttgggttggttggtgaagactcaagcg
gccgttgcttccgaggagatgccggataacttgaccgaagccgaaaggttgttgaaccaa
cacgcgaccctcaaggaggagatcaacggctacgaggaggactacgccaagatccaggcg
gccagcgacctgttggccttggaggagacggaggtcccctacctctcgttgcagcagtgg
ttgcagaagctggacgccggttggggcaaattgttgcagagctgggagacgcgacgagaa
atgctggtgcaatctcacgtcttccatcttttccttcgggatgtccaacaatgcgaaacc
agcctctacaaccaggagtccaccttggtccacgccgagctccccgatacggtggaaggg
gtgaacaacgccatcaagaaacacaaggacttcaccaccaccatggacctcaacctgcag
aagatccaactggccctacaagccggcgagagcctccaacgtcaaggcaacctctacagc
gaccgcgtggccgaggcgatggagggtctccgcaccaagagccatcgcaactaccagctg
gcgcaggagtggatgcagcggctcaaggaccacctggagctgcagcggttcctccaggac
tgccacgagctggatggttggatccgggagaaggtgctgatggcgggggacccctcccgg
gacccccccccccgcccccccaaaccatggctgaagcaccaggcgttcatggccgagctg
gcgcagaataaagagtggctggagaagatcgagaaggaaggtgaagaacttctcctcacc
aaacccgaattaaccggcgccgttcggcggcaactggaagagttacggcaatgttgggta
gagttggagagcaccagccaagccaggagccggcggttggcggaagccgccgccgccgag
cggttggcgcggagctacgccgagatggaggcgcggttggggaggttggaggagcagctg
gagacggtgggggcgggagccgacctgctcagcgtcagcaggcagctcaagaggctgcag
acgatggagtcgcaggtggaggagtggtacaaggaggtgggggagctgcaggtgcaggca
gcggcgctgccggcgcaggcagcgggcaggcaggcggtgggggagcggcagagcgcggtg
gggacccgcatcgtccgcctgatcgagcccctcaaggaacggcggcgaatcctcttggct
tccaaggaggttcatcaggtcagccacgagctggaggacgaggtgctgtgggtgcaggac
cgcctgcccttggccaccctgaaggaccacggcaccaacctgcagacggtccagcagttc
atcaagaagaaccagaacctccgccgggagatccaagttcaccgtcctcgcgtggacgag
gtgctggaacgcgccggagccgttgcctccattaaaagccccgaagctgaaggggtccga
cgtcttctggaacgtttggggacgatgtggggggagctgcaggagcaggcagagcgcagg
cagcagaccctggatgccacctatcaactggagcaatattatttcgacgtggccgaggtg
gagtcgtggttgggcgagcaagagttgctgttgatgagcgaggagaaggggaaggatgag
cagagcaccctacaactcctcaagaagcacctcttgacggaacaaacggtggagaactac
gaagagaccatcgcccaactctcccggcaatgccgtgctcttctagagctcggccatcct
caaagcgaacaggtcagcaggcggcagtcgcaggttgaccggctgtacgtgtctctgaag
gacctggtggaagaacgcaaggtcaagttggaacagcaatattggctctaccagctcaac
cgcgaggtggacgagctggagcattggatcgccgagaaggaggtggtggccggctcgccg
gagttgggacaggactttgaacacgttacgttactccaagagaaattcctggagttcgcc
agcgagacgggcagcgtggggcaggaacggatcgccgccgtcaaccaaatggtggacgaa
ctgatcgactacgggcacgccgacgccgccaccatcgccgaatggaaggacggggtgaac
gaagcttgggcggaccttctggagctgatggagacccgggctcagatgttggcggcttct
cacgaattacacaagttcttcaacgattgcaaagaaattttgggacaaatcgaagaaaaa
agacaacgcctgcccgaactggcagcccgggagggcaggacgtcggccggcgccttgcaa
cgggcgttgggtgccttcgaacatgacgtggaggtgttggtgacccaagtccggcagtta
caagaaggtgcggcccagttgaggaccctctacgccggggacaacgccgaggccatcgcc
gggagagagcaggaggttctacgggcgtggaaggagctcttggcggcgtgcgaggagtgc
cgcctccacgtcgccagcatcgccgataagatccgcttcgtcggtaccgtcagagatctt
ctcgcctggatggacggcatcctctgccagatcggcgccggagaaaagcccagggacgtc
tcctcggtggagctgctgatgaacgaccaccaaggtctgaagaacgagatcgaagcccgc
gccaagagcgtcgccgcctgcctggagctgggcaagaccctcatcctcggcaagagcccg
gcagccgacgagatcaaagccaacgtggagaagctgctagcgaagaagaaggagatgatg
gagaagtgggacaagcactgggaatggctgcagcagatgctggaggtgcaccagttcgcc
caggaggcggtggtggccgacgcttggctgacggcccaggagcccctgctgaagagccag
gagctgggcagcagcgtggacgaggtggagcagctgatccggcggcacgaggcgttccgt
aaggcggccgccgcgtgggaggagaggttcagctccctcagacggctcaccacgatcgag
aagctgaaagcggagcagaacaagcagccgccgacgcccctcctgagccgcaaatttttg
ggggaacccccgggggggtcaacgccgtcaccgggggggtctgagcgccccgaaagccgc
cggctggagccccgcgtcgcctacgtacgccacgagctccgtcccgagcgcctacaaccc
aagcttgaccgcgtccaaggacctcccgaggatggggggcccgggggggagccgcccccc
ccttccaccgccggtgagaccccggtgccccccaaaaccgacgagcccggggaggggagg
acggggctgctggaacggcgccgggagcggcgagagcgtcggttggaacggcaggaatcc
agcgagccggagccgccgcggcacgacggcaagggcggcggcaaagccacgctggccgac
atcgtggagcagctgcaggagaaggaggcgggtggccccttgccggcttcgccccgggag
cgcgagtcccccgcccgcttgcccaccggcccggaggggctaccggagaggacaccgcga
cccgaccggccccgcgcccgggaccgccccaaaccccgccgacggccacgccccaaagac
cccgcccagggtccgggggagacgcggaggtcgcggtcggccccggcgcagggcagcgcc
cccccgcccccgcccccccccacccacacggtgcagcacgagggcttcctcttccgcaag
cacgagctggatggacccaacaagaaggcctccaataggtcctgggtgaacctctactgc
gtcctgagcaagggtgacctgggcttctacaaggacgccaagggccaagccacgggcagc
acccacggtggtgaacccctcctcaacctccaccactccaccagcgaggtggccaacgac
tacaagaagaagaagaacgtcttcaagctcaagaccagcgatggaagcgagttcctcctg
caagccaaggatgaggaggacatgcgggggtggttgagggcgctggccgcctgcgcccag
gaacacgtcgaggtggcccggtggagccaaggtcttctcaccacctcctccaccgacgag
ggtctcccccggcgggagggcgatcggcgccccagcacctcggggagacggaagtga
DBGET
integrated database retrieval system
