Calonectris borealis (Cory's shearwater): 142074044
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Entry
142074044 CDS
T11211
Symbol
ACTN4
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor04510
Focal adhesion
cbor04517
IgSF CAM signaling
cbor04518
Integrin signaling
cbor04519
Cadherin signaling
cbor04520
Adherens junction
cbor04530
Tight junction
cbor04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
142074044 (ACTN4)
04518 Integrin signaling
142074044 (ACTN4)
04519 Cadherin signaling
142074044 (ACTN4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
142074044 (ACTN4)
04520 Adherens junction
142074044 (ACTN4)
04530 Tight junction
142074044 (ACTN4)
09142 Cell motility
04810 Regulation of actin cytoskeleton
142074044 (ACTN4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cbor04131
]
142074044 (ACTN4)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cbor04812
]
142074044 (ACTN4)
04147 Exosome [BR:
cbor04147
]
142074044 (ACTN4)
Membrane trafficking [BR:
cbor04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
142074044 (ACTN4)
Cytoskeleton proteins [BR:
cbor04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
142074044 (ACTN4)
Exosome [BR:
cbor04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
142074044 (ACTN4)
Exosomal proteins of colorectal cancer cells
142074044 (ACTN4)
Exosomal proteins of bladder cancer cells
142074044 (ACTN4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
DUF8720
XisI
Motif
Other DBs
NCBI-GeneID:
142074044
NCBI-ProteinID:
XP_074990541
LinkDB
All DBs
Position
32:669815..693666
Genome browser
AA seq
952 aa
AA seq
DB search
MRSGGAGGGGAEPVGAAGAERSDRSAMVDYHSAGQPYPYGGNGPGPNGDYMAQEDDWDRD
LLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIDEDFRDGLKLMLLLEVISGERLPKPER
GKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVDGNAKMTLGMIWTIILRFAIQDISVE
ETSAKEGLLLWCQRKTAPYKNVNVQNFHISWKDGLAFNALIHRHRPELIEYDKLRKDDPV
TNLNNAFEVAEKYLDIPKMLDAEDIVGTLRPDEKAIMTYVSCFYHAFSGAQKAETAANRI
CKVLAVNQENEHLMEDYEKLASDLLEWIKRTIPWLEDRSPQKTIQEMQQKLEDFRDYRRV
HKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGKMVSDINNGWQHLEQAEKGYEEWL
LNEIRRLERLDHLAEKFRQKASIHEAWTEGKEAMLKQKDYETATLSDIKALIRKHEAFES
DLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDVLGSLTHSRREALEKTEK
QLETIDELHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLIAAHDQFKSTLPDAD
KEREAILGIQREAQRIADFNSIKLSGNNPYTSVTPQIINSKWERVQQLVPKRDHALLDEQ
SKQQSNEHLRRQFASQANIVGPWIQTKMEEIGRISIEMNGTLEDQLNHLKQYEQSIVDYK
PNIDLLEQQHQLIQEALIFDNKHTNYTMEHIRVGWEQLLTTIARTINEVENQILTRDAKG
ISQEQMQEFRASFNHFDKDHGGALGPEEFKACLISLGYDVENDRQKRTGSMDTDDFRALL
ISTGYSLGDAEFNRIMSVVDPNNSGIVTFQAFIDFMSRETTDTDTADQVIASFKVLAGDK
NYITAEELRRELPPDQAEYCIARMAPYQGPEAVPGALDYKSFSTALYGESDL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcggcggggcgggcggcgggggcgcagagccggtcggcgcggcaggagcggag
cggagcgatcgcagcgccatggtggattaccacagcgccgggcagccctacccctacggc
ggcaacgggcccggccccaacggcgactacatggcccaggaggatgactgggaccgcgac
ctcctcctcgatcccgcctgggagaagcagcagcgcaagacgttcacggcttggtgcaac
tcccacctgcggaaggctggcacgcagatagagaacatcgacgaggacttccgcgacggc
ctcaagctcatgctgcttctggaggtgatttcaggggaacgattgccaaaaccggagcgg
ggaaaaatgagagtgcataaaatcaacaacgtgaacaaagccctcgatttcatcgccagc
aaaggcgtcaagctggtctctataggagctgaagagatcgtcgatggcaacgcgaagatg
acgctgggcatgatctggaccattatcctcaggtttgccatccaggacatctcggtggaa
gagacctcggcgaaggagggcttgctgctgtggtgtcagaggaagacggctccctacaag
aacgtcaacgtgcagaacttccacatcagctggaaagatggtcttgctttcaacgccttg
atccacagacaccgaccggagctcattgaatacgacaaactcagaaaggatgaccccgtc
acgaatctgaacaacgccttcgaagtggcggagaagtacctggacatccccaagatgctg
gacgcagaggatattgtaggcactctcaggcccgatgagaaggccatcatgacatacgtt
tcctgcttctaccacgctttctcgggtgctcagaaggcggagaccgcggcgaaccgcatc
tgcaaagtgttggccgtcaaccaggagaacgagcacctgatggaggactacgagaaactc
gcttccgacctgctggagtggatcaagcgcaccatcccttggctggaggaccgcagcccg
cagaagaccatacaggagatgcagcagaagctggaagacttccgcgactaccgacgggtc
cacaagccccccaaagtgcaggagaaatgccagctggagatcaacttcaacaccctgcag
acgaaactccggctgagcaacagacctgctttcatgccctccgaggggaaaatggtctcg
gacatcaataacggctggcagcacttggagcaagccgagaagggctacgaggagtggctg
ctgaacgagatcaggcggctggagcggctcgaccacctggccgagaagttcaggcagaag
gcgtccatccacgaggcctggaccgaaggcaaggaggccatgctgaagcagaaggactac
gaaaccgccaccttgtcggacatcaaagccctcatcaggaagcacgaagccttcgagagc
gacctggcggcgcaccaggaccgcgtggagcagatcgcggctatcgcgcaggagctcaac
gagctggattactacgactcgcccagcgtgaacgctcggtgccagaagatctgcgaccag
tgggacgttctgggttccctgacccacagcaggagggaggctctggagaaaacggagaag
cagctggaaacgatcgacgagctgcacctggagtacgcgaagagggcggcccccttcaac
aactggatggagagcgccatggaagaccttcaggacatgttcatcgtccacaccatcgag
gagatcgagggactcatcgctgctcacgaccagttcaagtccaccctgcccgacgccgac
aaggagcgcgaggccatcctgggcatccagagggaagcacagcggatcgcggacttcaac
agcatcaagctctctgggaacaacccctacacctctgtcaccccgcagatcatcaactcc
aagtgggaacgggtccagcagctggtgccgaagagggaccacgccttgctcgacgagcag
agcaagcagcaatccaacgagcatttacggcggcagttcgccagccaggccaacatcgtg
gggccctggatccagaccaagatggaggagatcgggcgcatctccatcgagatgaacggc
acgctggaggaccagctcaaccacctcaagcagtacgagcagagcatcgtggactacaaa
cccaacatcgacctgctggagcagcagcaccagctcattcaggaggccctgatcttcgac
aacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcagctcctcacc
accatcgcccgcaccatcaacgaggtggagaaccaaatcctcacccgcgacgccaagggc
atcagccaggagcagatgcaggagttcagggcctccttcaaccacttcgacaaggatcac
ggcggtgccctgggaccggaggagttcaaagcctgcctcatcagcttgggatacgatgtg
gagaatgaccgacagaagcgcacgggaagcatggacaccgatgacttccgagctctcctt
atctccacgggatacagcctgggcgacgccgaattcaatcggataatgagcgtcgtcgat
cccaacaacagcgggatcgtcaccttccaagccttcatcgacttcatgtcccgggagacc
accgacacggacacggccgaccaagtcatcgcctccttcaaagtcctggccggggacaag
aactacatcacggccgaggagctgcggcgagagctgccccctgaccaggccgagtactgc
atcgcccgcatggctccctaccagggccccgaggccgtccccggcgccctggactacaag
tccttctccacggcgctctacggcgagagcgacctctga
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