Calonectris borealis (Cory's shearwater): 142074218
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Entry
142074218 CDS
T11211
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
cbor Calonectris borealis (Cory's shearwater)
Pathway
cbor03320
PPAR signaling pathway
cbor04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
142074218 (RXRB)
03320 PPAR signaling pathway
142074218 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cbor03000
]
142074218 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cbor03310
]
142074218 (RXRB)
Transcription factors [BR:
cbor03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
142074218 (RXRB)
Nuclear receptors [BR:
cbor03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
142074218 (RXRB)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
142074218
NCBI-ProteinID:
XP_074990859
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Position
33:complement(259347..271628)
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AA seq
449 aa
AA seq
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MGDSDRDCRSPDSSSLSASPPPPEPSAPLHHPSMIGSAMTSSLNSPVASLGSPFPVISSS
MGSPGLPATPAIAYGPVSSPQINSTVNLSGLHPVSSSDDVKPPLGIRAVPCHPHGPGVAG
KRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCVVDKRQRNRCQYCR
YQKCLATGMKREAVQEERQRGKEKEGDGDLGANANEEMPVEKILEAELAVEQKSDQNVDG
AGTGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELLIASF
SHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGCLRAI
ILFNPDAKGLSNPGEVELLREKVYASLESYCKQKYPEQQGRFAKLLLRLPALRSIGLKCL
EHLFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcgaccgcgactgccggagccccgacagctcatccctgagcgcttccccc
ccccccccggagccgtcggcccccctccaccacccctccatgatcggctcggccatgacc
tcctccctcaactcccccgtcgccagcctggggtcccccttccccgtcatcagctcctcc
atgggctccccggggctccccgccacccccgccatcgcctacggccccgtcagcagcccc
cagatcaactccacggtgaatctctcggggctgcaccccgtcagcagctccgacgacgtg
aagccacctttggggatccgcgccgtcccttgtcacccccacggtcccggcgtcgccggc
aaacggctctgcgccatttgcggggatcgctcctcagggaagcattatggggtgtacagc
tgcgaggggtgcaaaggcttcttcaaacgcaccatccgcaaggacctgacctacacctgc
cgcgacaacaaggactgcgtggtggacaagcgccaacgcaaccgctgccagtactgccgc
taccagaagtgcctggccaccggcatgaagcgggaagccgtgcaggaggaacgtcaacgg
gggaaggagaaagaaggtgacggcgacctgggggccaacgccaacgaggagatgccggtg
gagaagatcttagaagccgaattggcggtggaacaaaaatcggaccaaaacgtcgacggc
gccggcaccggcggcagttcgcccaatgacccggtgaccaacatctgccaggccgccgac
aagcagctcttcacgctggtggagtgggccaagaggatcccccatttttccgagctgccc
ctggacgaccaagtcatcctgctgcgggcgggctggaacgagctgctcatcgcctccttc
tcccaccgctccatctccgtcaaggacgggatcctgctggccaccggcctccacgtccac
cgcaacagcgcccacagcgccggcgtgggggccatcttcgatagggtgctgaccgagctg
gtctccaaaatgcgggacatgcggatggataagacggagctgggttgccttcgcgccatc
atcctcttcaacccggatgccaaggggctttccaaccccggggaggtggagctgctccgg
gagaaggtctacgcctccctggagtcctactgcaagcagaagtacccggagcaacagggc
agattcgccaagctgctcctccgcctcccggccctgcgctccatcggcctcaaatgcctc
gagcacctcttcttcttcaagctcatcggggacacccccatcgacaccttcctcatggag
atgctcgaagcccctcaccagctctcctga
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