Calonectris borealis (Cory's shearwater): 142074295
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Entry
142074295 CDS
T11211
Name
(RefSeq) LOW QUALITY PROTEIN: protein deacetylase HDAC6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
cbor Calonectris borealis (Cory's shearwater)
Brite
KEGG Orthology (KO) [BR:
cbor00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cbor01009
]
142074295
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cbor03019
]
142074295
04131 Membrane trafficking [BR:
cbor04131
]
142074295
03036 Chromosome and associated proteins [BR:
cbor03036
]
142074295
Enzymes [BR:
cbor01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
142074295
Protein phosphatases and associated proteins [BR:
cbor01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
142074295
Messenger RNA biogenesis [BR:
cbor03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
142074295
Membrane trafficking [BR:
cbor04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
142074295
Chromosome and associated proteins [BR:
cbor03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
142074295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
142074295
NCBI-ProteinID:
XP_074990971
LinkDB
All DBs
Position
34:complement(387003..418117)
Genome browser
AA seq
1529 aa
AA seq
DB search
SRKRGIGGRKRGVLEGIWGRGGGAPKTPDLSPKLRAGPAPPPAAAVPPTRGDTTAPGPAW
LQPPGGAGCRGPPWSSWRWGAGGGPPFPRGGRSFPGAGGARRAGNGGAAGPLPPPGRVSL
VPWAEGGTLGGPPWAAPPPSEPPRFLELLQPPGSPPPRGPSCPPAPPPPCEARECVNCGA
TATPLWRRDGTGHYLCNAWGLYHRLNGHNRPLIRPKKRLLVSKRAGTVCSNCQTSTTTLW
RRSPRGDPVCNACGLYYKLHRVNRPLTMRKDGIQTRNRKSRPRGRSGGRGGAPAPGGRRT
PWGGRPCPPPPPHNPLPRTRLPSTPWDPSSSPDTSCPSPPPDPFLGGPGGVTLPPQPLPG
SPPPSAPSFNWGGGGAPITVWYWKWSWAQASLFGGCAWMLGSLGGLCPPPRGGGAGGTPT
KMLIQNGATPPAIVDSKMAASSGHTQDGGVQWGTPKMAAQHGSGRLRAAWPRPANSHAPP
FPSPPRAWLSPALFRSRLRPVPRSRLGVAPPRNVIAVRPASRGAAGPPCDAPPRAALEPR
PGCHGPGGAPRPPRSGGGSPRSSAEGGPGAAGRGWRRSYSAWTWARRRRRPRGRGWFTTS
DSPPFWRTRAPPRVRNRCRPRGRRWRSWGLTQRCVRVECRPATDEELLLVHSPSFLAQTE
TPGCPPAEGGPSRRAAGSLLALLGKVLSGDLRNGLALLRPPGRQAQPEARNLFNAVAIAA
RAAQRHLGVQRVLVVDWCAQPGRALPSLFQDDPSVLYFGVHRGEEPPATTGTGRGEGFTV
DLRWDEPGRTDGDYAAAFFHLLLPIAFEFQPQLVLVAAGFDVALGDPEGHMGVSPDGFAL
MTHLLSALAGGRLLLALEGGSEAGALAGGLGAVLRTLLGDPGDPPGPITPTPSGLASVAR
ALAIHRKYWSCLRCAEPEVEEQEEQEEEEEEEEEEEDLEDDGEPQGTPQEPAEQEELQPW
PRPAARTGLLYDERMEEHCNPWDSQHPEAPQRVTRIVERLKELGLAQRCLRLPARYALPA
ELRACHTRAHVAALAGTEGLRPRELRGAAERYNSVFLCPRSYDCARLAAGTACAAVTAVL
AGQVRSALAVVRPPGHHARPGAAGGFCLFNNVAVAARHGQRLAGGALRVLILDWDVHHGN
GTQKIFEEDPSVLYISLHRHDGSFFPGGSGGSPRRRGRGRGTGFTLNVGWGGPRAGDPDY
LAAMTRLVLPVACQFAPQLVLVSAGFDAGRGDPLGGCLVSPQTFGLMTHLLGGLAGGRLV
LVLEGGYNLGATAEGVGQCLGVLLGDPPALPPPRPPQPAALGAMARTRRAQRGCWGCLRL
PPPAAPPAETPPEPPSGAGSDDLTHRAGDITGAPPSAPPPLDAILRLGELHLGDTPGGGA
GGPQGAEPPPDPAPLEGATACPPSPPCLGEELDEGVLFAVTPLQECPHLGAVAPLPGGGL
EGNPPCGACGSRRENWLCLSCYQVLCGRYVGGHMLAHGGAAGHPXVLSLRDLSAWCYPCG
GYVHHPALLPAKTLLHRLKFGTAPPTPSL
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
agccggaaacggggaattggggggcgaaaacggggagttttggaggggatttgggggcgc
ggggggggggccccgaaaacgccggatttgagcccaaagctgagggcggggcccgcccct
ccccccgccgcggctgtccctccgacgcgcggtgacacgacggctccaggccccgcctgg
ctgcagccccccgggggagccgggtgtcggggccccccatggagttcctggcgttggggg
gccggagggggccccccctttcccagaggaggccggagctttcctggggctgggggggcc
cgaagggctggaaacgggggggctgctggccccctaccccccccaggccgtgtgtcactg
gtgccgtgggccgagggggggacgttggggggccccccctgggccgccccccccccctca
gagcccccccgattcctggagctgctgcagccccccggcagcccccccccccggggcccc
tcctgccccccggccccccccccgccctgcgaggcgcgggagtgcgtgaactgcggggcg
acggcgacgccgctgtggcggcgggacgggacgggccattacctctgcaacgcctggggg
ctctaccaccgcctcaacggccacaaccggcccctcatccgccccaagaagcgcctgctg
gtcagcaagcgggccggcaccgtctgcagcaactgccagaccagcaccaccaccctctgg
cgtcgcagcccccggggggaccccgtctgcaacgcctgcggcctctactacaaactgcac
cgggtgaaccgccccctgaccatgcgcaaggacgggatccagacccgcaaccgcaagtct
cggccaaggggaagaagcggcggcagggggggggcgccggccccgggggggagacggacg
ccatgggggggccgcccctgcccccccccgcccccccacaaccccctcccgaggacccgg
ctgccctctacgccctgggacccctcgtcctctccggacacctcctgcccttccccaccg
ccggacccttttttggggggcccggggggagttacgctgcccccccaacccctgccgggg
tcccccccgccctcagcccccagctttaactgggggggggggggcgcccccattacagtt
tggtattggaaatggagctgggctcaggcctcgttatttggggggtgcgcttggatgctg
gggtctttgggggggttgtgccccccccctcggggggggggggcgggggggacacccacc
aaaatgcttatccaaaatggtgccaccccccccgccatagtagactccaagatggcggcg
tccagtgggcacacccaagatggcggcgtccagtggggcacacccaagatggcggctcag
cacggcagcggccggctgcgagccgcgtggccccgccccgcgaatagccacgcccctcca
ttcccatccccgccccgcgcttggctaagccccgccctcttccggtcccggctccgcccc
gtgcctcgctcccgtctcggcgtcgccccgccccgtaacgtaatcgccgtgcgcccggcg
tcgcgcggggctgcaggccccccttgcgatgcccccccccgcgcggcgctagagccccgc
cccggctgtcatgggccgggcggggcgccgcgccccccccgcagcggggggggctccccg
aggtcaagcgccgagggcgggcccggagccgccgggaggggctggaggcggagctacagc
gcctggacctgggcgcggaggcggcggcgcccacggggacggggctggtttacgacgagc
gattcgccgccgttttggaggacgagagcacccccgagggtccggaaccgctgtcggccg
cgtgggcgacgctggaggagctgggggctgacgcagcgctgcgtccgcgtggagtgccgc
ccggctaccgacgaagagctgctgctggtgcacagcccctccttcctggcccagacggag
acccccggctgcccccccgcagaggggggcccctcccgccgggccgcggggtcgctgctg
gcgctgctggggaaggtgctgagcggggacctgcgcaacgggctggcgctgctgcgcccc
cccgggcgccaggcgcagccggaggcgaggaacctcttcaacgccgtcgccatcgcggcg
cgggcggcccagcggcacctgggggtgcagcgcgtcctcgtcgtggactggtgcgcccag
cccggccgggccctcccctccctcttccaggatgaccccagcgtcctgtatttcggggtg
caccggggcgaggagccccccgcgaccaccggcaccggccggggcgagggcttcaccgtc
gacctgcgctgggatgagcccggcaggacggacggcgactacgcggccgccttcttccac
ctcctcctccccatcgccttcgagttccagccccagctcgtcctggtcgctgccggcttc
gacgtcgccctcggggacccggagggacatatgggggtctctcccgacggcttcgccctc
atgacccacctgctgtcggcgctggcggggggacgcctgctcctcgccctcgaggggggg
tcggaggcgggggcgctggcgggggggctgggcgccgtcctgcgcacgctgctgggggac
cccggggacccccccgggcccatcacccccacccctagcggcctggccagcgtggcccgt
gccctggccatccaccgcaagtactggagctgcctgcgctgcgccgagccggaggtagag
gagcaagaggagcaggaggaggaggaggaggaagaggaggaggaggaggatttggaggat
gatggagaaccccaaggcaccccccaagagccagcggagcaagaggagctccagccctgg
ccccgtcccgccgcccgcacagggctgctgtatgacgagaggatggaagagcactgcaac
ccctgggacagccagcaccccgaggcgccgcagcgggtgacgcggatcgtggagcggctg
aaggagctggggttggcgcagcgctgcctgcgcctgcccgcccggtacgccctgcccgcc
gagctgcgcgcctgccacacgcgggcccacgtggcagcgctggcggggacggaggggctg
cgtccccgggagctgcggggggcggccgagcgctacaactccgtcttcctctgcccccgc
tcctacgactgcgcccgcctggcggccggcaccgcctgcgccgccgtcaccgccgtcctc
gccgggcaggtgcggagcgcgctggcggtggtgcggccccccgggcaccacgcccgcccc
ggcgccgccggcggcttctgcctcttcaacaacgtggcggtggcggcgcggcacgggcag
cgcctggcggggggggcgctcagggtgctcatcctggactgggacgttcaccacggcaac
ggcacccaaaagatcttcgaggaggaccccagcgtgctgtacatctccctgcaccgccac
gacggctccttcttcccggggggctccggggggtccccgcggcggcgggggcgggggcgc
ggcaccggcttcaccctcaacgtggggtggggggggccccgcgccggggaccccgactac
ctggcggccatgacccgcctggtgctgcccgtcgcctgccagtttgccccccagttggtg
ctggtgtcggcggggttcgacgcggggcggggggaccccctgggggggtgcctggtgtcc
ccccagaccttcggcctcatgacccacctgctgggggggctggcgggggggcgcctcgtc
ctcgtcctcgagggcgggtacaacctgggggcgacggcggagggggtggggcagtgcctg
ggggtgctgctgggggaccccccggcgctgccccccccccggcccccccagccggcggcg
ctgggcgccatggcccgcacccgccgggcccagcggggctgctggggctgcctgcgcctg
cccccgcccgccgccccccccgctgagacccccccggagcccccctcgggggcgggcagc
gatgacctcacacaccgcgccggtgacatcacgggggccccccccagcgcccccccgccc
ctggacgccatcttgcgcctgggggaactgcacctgggggacacccccgggggcggggcc
ggcggcccccagggggcggagcctcctccagaccccgcccccctggaaggggcgaccgcc
tgccccccctcgcccccctgcttgggggaggagcttgacgagggggtgctgttcgccgtg
acccccctgcaggagtgtccccacctgggggcggtggcccccctccccggggggggcctg
gaggggaaccccccctgcggggcctgcggcagccgccgggagaactggctctgcctcagc
tgctaccaggtgctgtgcgggcgctacgtgggggggcacatgctggcgcacgggggggcc
gcggggcaccccntggtcctgagcctgcgggacctgtcggcctggtgctacccctgcggg
gggtacgtccaccaccccgccctgctccccgccaagaccctcctccaccgcctcaagttc
ggcaccgccccccccaccccctccctctga
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integrated database retrieval system
